Coregonus clupeaformis (lake whitefish): 121547408
Help
Entry
121547408 CDS
T08357
Name
(RefSeq) protein unc-13 homolog D
KO
K19728
protein unc-13 D
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121547408
Membrane trafficking [BR:
cclu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121547408
BRITE hierarchy
Motif
Pfam:
C2
MUN
Motif
Other DBs
NCBI-GeneID:
121547408
NCBI-ProteinID:
XP_041714613
LinkDB
All DBs
Position
31:28488535..28501592
Genome browser
AA seq
1132 aa
AA seq
DB search
MSHQRGAFGCSSTSAMMPSQDGISTTGDNLLQPPDQTCGSTRNRQRQSSPARKLGMTRKQ
KDRRDFKENENPEEKEKRHKEQELKPLYKELLYTITHMLGKPASAEVFTDNQLHQYIREA
FSMAVDEHQSLTERVQSTEPPVYCLMATVKEAKGILGKDVSGFSDPYCLLTILEDEKESR
TRRSRPKPRKAVVKDAVSDEKVFTTDTKIQTLNPIWNQTFVLEFEDTAGASFHIEMWDKD
EEVSLAQKLEEIRTNFHGLRRMIKDAKKEKGQDDFLGSIVLRLKDLHFTEDNWYVLEPRT
ETYPDRGQCHLQLKFIHKERDGTLSAGRSAYVNYCGILQQFVQSHISKQQGSGPWKGELC
GEGQTLLELYATQNNLSPFLQDLAKWVAYSKLYQSLEVDSSVLLQQLTSIEYHWHQQELP
HQQKQELGDSLHGFLQYGLCLVAKYRDIFPPTQDATTRLHTLLRILSQVCKTQAFQKLNP
AQFDLHDEVNEAVHSGTQEWFTIKKGLHQPMTKDLTETVSALSRLIGEVQQDIKHNKDSW
NRVFVSAVQVDVFTVVYQKLDSLLAGEVRDTLRLLEGEMEQSLANSLFPLYLSLQVIHKD
KAFLQKRGNLLELTNFHEGFREALPYWLNKAFSTTLERVERAVQVDQLQPLQSGPVPIKH
SSSAVDLVACVQPICQLWEQLSWPDPEEAFMLMVKLTEDVCKIVVNYCRILKDRVRELSE
NSDHGIAVNMLCVVVNDLEHLRSVLTRLPQQLNWAGLRERTLQVIGDPQFHNVLPSQLQH
AHGVLNKEIRSALETVGRKLNSDIAMYVRSMSTRCRIPSKSTEEAVVPLIQYLERELQYM
NENLVQENFNSLLTPLWTNSIRTLYQVATQQKQEEGLMVFCQRLQYTLQCLEQCFHAEGN
GLPLDTLHTDDYKILKAHLTHNSLNCQQLIEKFLDRKVWEQKVYSGEKYGAVTLIASYRR
SDHRLRVEVLNAANLLPMDSNGFSDPFVQLCLEPRHVFSEVEPRTTQIKNCDLNPLFDEA
FEFMVSVEQCQAAGACLVVTVLDYDTLRTDDFEGEAFLALKAVPGVGGGSGDGQGHQPDP
SPAQIRLPLIHPKPNDDSILKLLESRRGEREAQVFVKKRRQREKQSQEGKQQ
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccaaagaggggcgtttggctgttcatccacctcagccatgatgccaagccaa
gatggaatctccacaacaggagacaacctactacaacctcccgatcagacttgtggctca
actaggaacagacagagacagagctcccctgcccgtaaactggggatgaccagaaaacag
aaggacaggagggactttaaagagaatgagaacccagaagagaaagagaaaagacataag
gagcaagagctcaagccgctgtataaagagctgctctatactatcacccacatgctgggg
aagccagcctcggcagaggtcttcactgacaaccagctccaccaatacatcagagaggct
ttctctatggcagtggatgaacaccagagtctgacagagagagtccagagcacagagcct
ccagtctactgtctgatggccactgtgaaggaagccaagggcatcctgggaaaagacgtc
agtggtttcagtgacccatactgcttactgaccatcctggaggatgagaaggagagcagg
acacggcggtccagacctaaaccccgtaaagccgtggtgaaggacgccgtctcagacgag
aaggttttcacgacagacaccaagatacagaccctcaaccccatttggaaccagaccttc
gtactggagtttgaagacactgcaggggccagcttccacatcgagatgtgggacaaggat
gaggaggtgtctctggcacagaagctagaggagatcagaacgaatttccatggactgagg
aggatgatcaaggatgctaagaaggagaaaggccaggatgatttcttgggaagcattgtg
ctgagactgaaggacctgcattttacagaggataactggtatgttctggagccgaggaca
gagacttatccagatcggggccagtgtcatctgcagctcaaattcatccataaagagaga
gacgggacattgagtgctggtcgtagtgcttacgtcaactactgcgggatcctacagcag
tttgtccagtcacacatctctaagcagcagggtagtggtccatggaagggggagttgtgt
ggggagggacagaccctgttggaactctacgccactcagaataacctctcacctttcctg
caggacctggcgaagtgggtggcctacagtaaactctaccagagtttagaggtggactcc
tcagtactgctccagcagctgaccagtatagagtaccactggcaccagcaggagctgccc
caccaacagaaacaggagctaggggactctctccatggtttcctgcagtacggactgtgt
ctcgtagccaagtacagagacatctttcccccaacgcaggacgctaccactcgcctacac
acactgctcaggatcctgtctcaggtctgtaagacgcaggcatttcagaagctgaaccca
gctcagtttgacctacatgacgaggtcaacgaggctgtacattctggtacacaggagtgg
ttcaccataaagaaagggttacaccagcccatgaccaaggacctgacagagactgtgagt
gctctctctaggctgataggtgaagtacagcaggacatcaagcacaacaaggacagctgg
aatagagtgtttgtcagtgctgtgcaggtggatgtgttcactgtagtctaccaaaagctg
gactccctgctggcgggggaggtgagagacactctaaggctgttggagggcgagatggag
cagagtttagccaatagcctgttccctctctacctaagtctacaggtcatccacaaagac
aaggccttcctacagaaaaggggtaatctgttggagctgactaacttccatgagggcttc
cgtgaggcgcttccctattggttgaacaaggccttcagcaccactctggaacgggtggag
agagctgtacaggtggaccagctccagccactgcagtcaggcccggtgcccataaaacac
agctcatcagcagtagacctggtggcctgtgtccagcccatctgtcagctgtgggagcag
ctctcctggccagaccctgaggaggccttcatgctcatggtcaaactcactgaggacgtg
tgtaagattgttgtgaactactgtcgtatcctgaaggatcgggtcagggagctgtctgag
aactcagaccacggcatcgctgtcaacatgctgtgtgtagtagtgaatgacctggaacac
ttgagatcagtgctgacccgccttccccagcaactcaactgggcaggacttcgagaacgc
acccttcaagtgataggggaccctcagttccacaatgtgctcccctcacagctgcagcat
gcacatggggtcctcaacaaagagatacgctctgccttagagaccgttggacggaagctg
aattcagacattgcgatgtacgtccgtagcatgtctactcgatgcagaatcccctccaag
tccactgaagaagctgtggttcccctgatacaatatctggagagggagctgcagtacatg
aatgagaacctagtccaagagaacttcaacagtctgttgactccgttgtggactaactcc
ataaggaccttataccaggtagctacacagcagaagcaggaggagggactcatggtgttc
tgtcaacgactgcaatacacactccagtgtctggagcagtgttttcatgctgaggggaat
ggactgccactggatacccttcacacagacgactacaagattctgaaagctcatctgaca
cacaactctctcaactgccagcagctcatagagaaattcctggatagaaaagtatgggag
cagaaggtttacagtggagaaaagtacggcgcggtcacactcatagcatcctacaggagg
tctgaccatagactcagagtggaagtattgaatgcagctaacctcctacccatggactcc
aacggtttcagtgatccgtttgtccagttgtgtctggagcctcgtcatgtgttttctgag
gtggagcctcgcaccacacagatcaagaactgtgacctcaaccccctgttcgacgaggcc
ttcgagtttatggtgtcggtggagcagtgccaggctgcaggggcatgtcttgtggtgacc
gtgttggactatgacaccctgagaacagacgacttcgagggggaggccttcctggctctg
aaggcagtgccgggggtcggaggggggtcaggggatggacaggggcaccagccagatccc
tccccggcccagatacgcctgccgctcatacaccccaaaccaaatgatgacagtatcctg
aagctgttggagtcacggagaggagagcgagaggctcaggtgtttgtgaagaaacgcaga
cagagagagaaacagtcacaggaggggaaacaacaataa
DBGET
integrated database retrieval system