Coregonus clupeaformis (lake whitefish): 121548166
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Entry
121548166 CDS
T08357
Name
(RefSeq) CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1 isoform X1
KO
K00780
beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4A) [EC:
2.4.3.2
2.4.3.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00512
Mucin type O-glycan biosynthesis
cclu00533
Glycosaminoglycan biosynthesis - keratan sulfate
cclu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cclu00604
Glycosphingolipid biosynthesis - ganglio series
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121548166
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121548166
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121548166
00604 Glycosphingolipid biosynthesis - ganglio series
121548166
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121548166
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.2 beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3-sialyltransferase
121548166
2.4.3.4 beta-galactoside alpha-2,3-sialyltransferase
121548166
Glycosyltransferases [BR:
cclu01003
]
Terminal extension
Sialyltransferase
121548166
BRITE hierarchy
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GFIT
Motif
Pfam:
Glyco_transf_29
T26-6p_Ig-like_dom
DUF416
Motif
Other DBs
NCBI-GeneID:
121548166
NCBI-ProteinID:
XP_041715449
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Position
32:1915794..1922642
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AA seq
320 aa
AA seq
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MNIFRIRKGFLTTVLLCFTTIVVFYSGQQSSNSLVDFVTNALRPLDGIFSPQPDDDPWFQ
KCFIRSIKPFLTRENKKLSNDTRTWWRKMQNDRSTANFSEVVEKLFQVIPDADLYPERHG
TCAVVGNSGNLKRSHYGAVIDSSDVIIRMNMALTSGYEEDVGNRTTYHVMYPESAIDLEN
ATRFLLIPFKTLDLQWLPGAVTTGTNITFSYVPLRQKIKANKDLVLVLNPVFMKYVHESW
LDNQGKYPSTGFMALILALHICDEVNVYGFGEDKDGNWHHYWETLTNRKLRTGLHNGSYE
YNVTVKLSEIHKLQIHKGFH
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcttcaggattagaaaaggttttctaaccaccgttctactctgcttcactact
atagttgtgttttattctggacagcaatcctccaattcacttgtggattttgttacaaat
gcccttcggccgctagacgggatcttctctccacagccggacgatgacccatggtttcag
aagtgcttcatcagatctatcaaaccatttctgacgagagagaacaagaaactctccaat
gataccagaacgtggtggcggaaaatgcagaatgaccgtagcacagccaacttcagtgag
gtggtggagaagttgttccaggtcatccccgatgctgacctctaccctgagcgccatggg
acctgtgctgtggtggggaactctgggaacctcaaacgctcccactatggagccgtcatc
gactccagtgacgtcatcataagaatgaacatggctcttacctctggctatgaggaggat
gttgggaaccggaccacgtatcacgtcatgtacccagagagtgccatagatctggagaac
gccactaggttcctgctgatccctttcaagacactggaccttcagtggctaccaggcgcc
gtgaccactgggactaacatcactttctcatatgtacctcttagacagaagataaaggcc
aacaaagatttggtattggttctgaatcctgtgtttatgaaatatgttcatgaatcctgg
cttgacaatcaaggaaaatacccctccaccggattcatggctttgatattggccctacac
atctgtgacgaggtgaatgtgtatggatttggggaagacaaagatgggaactggcaccac
tactgggaaaccctaaccaatagaaaactcagaactggactacacaatggaagctatgag
tacaacgtcaccgtgaagctctcggaaatacacaaactacagatacataagggatttcac
taa
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