Coregonus clupeaformis (lake whitefish): 121548874
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Entry
121548874 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor coactivator 1-like
KO
K09101
nuclear receptor coactivator 1 [EC:
2.3.1.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121548874
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
121548874
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
121548874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NCOA
Nuc_rec_co-act
SRC-1
PAS
PAS_3
PAS_9
PAS_4
PAS_13
Motif
Other DBs
NCBI-GeneID:
121548874
NCBI-ProteinID:
XP_041716430
LinkDB
All DBs
Position
33:15719714..15816380
Genome browser
AA seq
1450 aa
AA seq
DB search
MSAVGERALDPATPESRKRKGSPCDTSEQSVEKRRRELECRYIDELAELLSANMGDIASL
NVKPDKCHILKSTVDQIQQIKRREQEKAALMSPEDEVQKSDISSSSQGMVEKEALGPLLL
EALDGFFFVVNREGGIVFVSENVTGYLGYTQEELMNSSVYSILHVGDHGEFVRNLLPKSL
VNGVPWPQEQSRRNSHTFNCRMLKRPPDEVDSENQEARQQYDIMQCFTVSQPKAMQEEGD
DLQSCLICIACPMPHPQQLPTISTESFITKQDPTGKIISIETSALRATGRPGWEDLVRKC
IYAFFQPQGKEPSHAKKLLHEVMTHGTAISPLYRFNLSDGTPLSAQTRCKFCCPPNHDVQ
PFIMGIHTIDREHNTASSQENTNSSLLLTHRSPAPSQPSHSPDLPPGSEASQAPGPTSSL
HLNNGNSSGTTAPTTPTSHSAGYLTSNRMYPQQVNSPSPLGRPPRGSPGLGGSPRVPGNP
FSPSTSGLHSPAGSLGGGGGGGGGGILSRQHSGGDSGARTPLGFSLPSPLPQRQASTPTS
SPACPPPAKPPEGGGGGGGVDDLAKGKLGWNAKLNQLLDNGGVGPPRDPKNTSPHPNTHP
TKPTSTPQCPASHSTLTERHKILHRLLQDSSPAEGGNSKESEIKKEPPTSPATANPNGPS
TTPQDHQLLRFLLDTDEKDLGDLPPPAALSLQTVRVKTEKRASGDTTPCAAACPKPSPKP
SPADSRPSRDPFLSGPADLDPLSQLLPTLRGPAGAKQGSEEQGGPQTQALSSHSQTQPQQ
RLHSPRLQSPLQPKPQNHFQLQSPTQLQLQAQNQLQSPTQLQSPTQLQSPTQLQSPTQLQ
SPTQLQPGEANIPRAVTVKREPPGTPSRGLTDGSSLQNQSHFDFFSPSQRPGQAELFQTA
KDSSSPFTESGLMNSFNSNTVMSKMETDSQQFQTLALTETVSFDGGMGNTVQALLASPQE
QCVPCPLDELLCPPTTSEGRNDEKALLDQLVSFLSGTDESELAELDRALGIDKLVQGGCF
DPIPQRFPSQPPATTPISMDPKLPSYRSQXSAPAPLPSSLQRYQGCRVWGAFAGGMILRP
GMGRAPGMANQLRLPPNQLRLQLQQRLQGPQQLQNRLAAMSQFPGEAHVAMGMRQGVQQP
QMPSQPPLNAQMLAQRQRELYSFQHRQRQLLQQKVMLMRQGMGGGGPMGATRGQKGPQPQ
QQQFGYPPSYSPMPGNPPSSPSLFNPMGGTQDPKLSGQGPMGSQATMMGGMQGQFGGAVN
SAVQLVLFQQFGGPGMVQQGDPSFPPELSPTSPLLSPQNSTSQSPLLQQTQPPPGYQTPD
MKSWQQAGMGSNSLFSQSGQTTPQAFGQQGVYNNMSITVSMAGGSGGVGSLPSIGPPVGM
GNSNLGDINSMCNDQVQQVQVFADVQCTVNLVGSDSYLNQSGSIGPQKGPQGPQSSQSQQ
KSLLQQLLTE
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgtaggggaaagggccctggaccctgccacgccagagtcccgcaagaggaag
ggctcaccatgcgacacctcagagcagagtgtggagaagcggcggagggagctggagtgt
cgttacatagacgagctggccgagctactgtctgccaacatgggcgacatcgccagcctc
aacgtcaagccagacaagtgtcacatcctcaagagcactgtggaccagatccagcagatc
aaacgccgcgagcaggagaaagcagctctgatgtcaccggaagacgaggtgcagaagagt
gacatctcgtccagtagtcagggcatggtggagaaggaggctctggggccactgctgctt
gaggctctggacggcttcttctttgtggtgaaccgcgagggtgggatcgtgtttgtgtcg
gagaatgtgacgggttacctaggctacacccaggaagagctgatgaactccagtgtctac
agcatcctccatgtgggagaccacggcgagtttgtccgcaacttgctgcccaagagcctc
gtaaacggggtgccgtggccccaggagcagagtcggaggaacagtcacacgtttaactgc
cggatgctaaagaggcctcctgatgaggtggactcggagaaccaggaggcacgacagcag
tacgacatcatgcagtgtttcactgtctcccagcccaaagccatgcaggaggagggagat
gacctgcagagctgcctgatctgcatagcctgcccgatgccccacccccagcagctcccc
accatcagcactgagtccttcatcaccaaacaggaccccacaggaaagatcatctccata
gagaccagtgctctgcgggcgacagggcgaccgggctgggaggatcttgtcaggaagtgc
atctacgccttcttccagccacagggcaaagaaccctcccacgccaagaagctgctccac
gaggtgatgacccatggcacggccatcagtcctctttaccggttcaacctgagcgatggg
acccccctcagcgctcagacacgctgcaagttctgctgcccccccaaccacgacgttcag
cccttcatcatgggcattcacactattgacagggaacacaacactgctagctctcaggaa
aacactaactccagccttctactgacccataggagccctgctccctcccagccctcccac
tcccctgacctccccccgggcagcgaggccagccaagccccaggccccacctcgagcctc
catctcaacaacggcaacagctccggcaccaccgcccccaccacacccaccagccattca
gcagggtacctgacgtccaaccggatgtatcctcagcaggtcaacagcccctcgcccctg
ggcaggccccccaggggcagtccggggctgggcggcagcccgcgtgtcccagggaacccc
ttttccccttccacctctggcctgcactctccggcagggtccctgggaggtggaggtggt
ggcgggggtggtggaatcctcagcaggcagcactctggtggggacagtggagcaaggacc
cctctgggtttctccctgccctcccctttacctcagaggcaggccagcacccccaccagc
tcaccagcgtgccctccccccgccaagccccccgagggaggaggaggaggtgggggagta
gatgacctggctaaaggaaaactagggtggaacgccaaactcaaccagctcctggacaac
ggtggagtggggccgcctagggaccccaaaaacacttctccccaccctaacacccacccc
accaaacccacctccacccctcagtgcccggcctcacacagcacgctgacggagcgccac
aagatcctccaccgcctcctgcaggacagcagcccggccgagggcggcaacagcaaggag
tctgagatcaagaaggagccccctaccagccctgccaccgccaaccccaacggaccctcc
accacccctcaggaccaccagctgctgcgcttcctcctggacacggatgagaaggacctg
ggagacctgccccctccggccgctctcagtctgcagacggtcagggtcaagactgagaag
agggccagcggggacactacgccctgcgctgcagcctgccccaaacccagccccaaaccc
agccctgcagacagcagaccgtccagagacccgttcctcagtggacctgctgacctggac
cctctcagccagctgctgcccaccctcaggggccccgcaggggccaagcagggcagcgag
gagcagggtggtccccaaacccaggccctgtcgtcccatagccaaacccaacctcaacaa
cggctccacagccccagactccaatcacctcttcaacccaaacctcagaaccatttccag
ctccaatcccctactcagctccagctccaggcccagaaccagcttcagtcccctacccag
cttcagtcccctacccagcttcagtcccctacccagcttcagtcccctacacagcttcag
tcccctacccaactccagcccggtgaggccaacattcccagggccgtgactgtgaagagg
gagcctcccggaacaccaagccgagggctcactgatggctccagcctgcagaaccagtca
cactttgacttcttcagccccagccagagaccgggacaagcggagctcttccagacagcc
aaagacagcagcagcccctttacagagtctggactcatgaactcattcaactccaacacc
gtgatgtctaagatggagacagactctcagcagttccagaccctggccctgactgagact
gtgtcctttgatggaggcatgggaaacactgtgcaagcccttctggcctcccctcaggag
cagtgtgtcccgtgcccgctggatgagctgctgtgtccccccaccacctccgaggggcgt
aacgacgagaaggccctcctggaccagctggtgtccttcctgagtggcacagacgagagc
gagctggcagagctggacagagcccttgggatcgacaagctggtgcagggcggctgcttc
gaccccatccctcaacggttcccctcccagccccctgcaaccacccccatctccatggac
cccaagctgcccagctaccgctctcagnnttcagcaccggcccccctgcccagttccctc
cagagataccaggggtgcagagtatggggggccttcgctgggggcatgatactgaggcct
ggcatgggcagagcgcctggcatggccaaccagctccggctgccacccaaccagctgagg
ttacagctgcaacagaggctgcagggcccacagcagctgcagaacaggctggctgccatg
agccagttcccaggggaagctcacgttgccatggggatgcgtcagggcgtgcagcagcct
cagatgccatctcagccacctctaaacgcccagatgctggcccagaggcagcgggagctc
tatagcttccagcaccgccagaggcagctcctgcagcagaaggtcatgttgatgaggcag
ggcatggggggcggggggcctatgggggccaccaggggacaaaaaggaccccagccacag
caacaacagtttggctaccctccaagctacagccccatgccagggaacccacccagctcc
cccagcctcttcaaccccatgggagggacccaggatcctaagctgtcgggccagggccct
atgggcagccaggcaactatgatgggggggatgcagggacagtttgggggggcggtgaac
tcggcggtgcagcttgtgctcttccagcagtttggaggaccgggtatggtccagcaagga
gacccctcattccctccagagctcagccccaccagtcccctgctgtcccctcagaactcc
acctcccagagtcctctgctccagcagacccagcctcctcctgggtaccaaacacctgac
atgaagagttggcagcaagctggcatgggcagcaacagcttgttcagccagtctggtcag
acgacgccccaggcctttggacaacagggggtctacaacaacatgagtatcaccgtgtca
atggcaggaggctcagggggggtgggctcgctaccttccataggaccacctgttggcatg
ggcaacagtaaccttggcgacatcaactccatgtgtaacgatcaggtacagcaggttcaa
gtgtttgccgacgtccagtgtacggtgaacctggtgggcagcgactcctacctgaaccag
tcggggtccataggcccccagaaaggcccccaggggcctcagagcagtcagtcccagcag
aagagcctcctccagcagctcctcacagagtga
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integrated database retrieval system
