Coregonus clupeaformis (lake whitefish): 121549216
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Entry
121549216 CDS
T08357
Name
(RefSeq) prostaglandin E2 receptor EP2 subtype-like isoform X1
KO
K04259
prostaglandin E receptor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121549216
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121549216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121549216
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Lipid
Prostaglandin
121549216
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
121549216
NCBI-ProteinID:
XP_041717001
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Position
33:5875401..5877521
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AA seq
369 aa
AA seq
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MDYKNNITCRDSVTVSSGNLYMSAAMFSAGVLGNLIALVLLEMRRRRQSPSLFQVLVTAM
VFTDLLGTFSVSPLVLASYTQNRTLVGMSENGAVCAYFGFSMTFLSLATLAILCAMALER
YLSFGHPYFYERHLRKRCGYITITLIYLICIFFCLAPFVGFGDYVQYCPGTWCFFDMIQT
ETKQKVYVGVYASLTLIMISTTVVCNLSVVSHLIMMYRRCKARRGGFTRRIRFYQRSLSM
TEEVEHLLLLVFITVAFVICSFPLVLHVLVNLTGVSKPRYGNDLAALRLLSFNSIIDPWL
FIILSPSVLRFLWRKLTLCKPPEAPTFHQEKPLPVGLKLSPPSPPMELQNNEVQRHCVMH
MDQGANGPL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggattacaaaaataatattacctgccgtgacagtgtcactgtctcttccggaaatctc
tatatgtccgcggcaatgttctcggcgggagttctgggcaatttaatcgccttggtcctt
ttggagatgcggcgccggcggcaaagtccatccctgttccaggtgctggtgaccgcgatg
gtgtttacggacctactgggtactttctccgtcagtcctctcgtactagcctcttataca
caaaacaggaccttggtgggtatgagtgaaaacggagcagtatgcgcctattttgggttc
agcatgacttttctaagcctcgccactttggccattctgtgcgccatggctttggagcgc
tacctctcctttggacatccgtacttttacgagcgccacttgagaaagcgctgcggatac
atcaccattacactcatctacctgatctgcatctttttctgcctagcacctttcgtgggt
tttggagattacgttcaatattgtccggggacttggtgcttctttgacatgatccaaacc
gagaccaaacaaaaagtatacgtcggtgtgtatgcgtcattgactctcatcatgatttcg
accacggtggtttgtaacttatctgtcgtctcccacttaattatgatgtataggaggtgt
aaagcgcgccgcggtggttttacgcgacggatacggttctaccaaagatccctctccatg
acggaggaagtggagcatcttctgcttttggtgttcataacggtggcttttgttatctgt
tcgtttcctttagtgctccatgtgttggtcaacctcacgggcgtgtcaaagccgaggtat
ggcaatgatcttgctgctctccgcctgctgtccttcaactccatcatcgacccctggctc
ttcatcatcctcagcccctcggtgctgcgcttcctctggaggaagctgacactgtgtaag
ccccctgaggcccccacattccaccaggaaaagcctctccccgttgggctaaaactctct
cctccaagcccacccatggagctccaaaacaacgaagtacagagacattgtgtcatgcat
atggaccagggggccaatggcccactctag
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