KEGG   Coregonus clupeaformis (lake whitefish): 121549496
Entry
121549496         CDS       T08357                                 
Name
(RefSeq) apoptotic protease-activating factor 1-like isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04115  p53 signaling pathway
cclu04210  Apoptosis
cclu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    121549496
   04115 p53 signaling pathway
    121549496
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121549496
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz APAF1_C Beta-prop_EML_2 NB-ARC WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I WDR55 APAF-1-like_WHD Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th CARD Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_TEP1_C RMC1_N Beta-prop_EIPR1 PEP5_VPS11_N Beta-prop_WDR35_TULP_N WD40_like Ge1_WD40 eIF2A Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR11_2nd AAA_16 NACHT nSTAND1 AAA_22
Other DBs
NCBI-GeneID: 121549496
NCBI-ProteinID: XP_041717224
LinkDB
Position
Unknown
AA seq 1266 aa
MAMMEEGARSCLLQSRSNLEQDIRASYLMDHMISDGVLTGDEEERIRSKPTRREQAAALL
ELLLRKDNQAYISFYNALVRESYGDLASLLHNSLPLVSPEAEKSFSDAGTHYVQTVLSEG
GVPQRPVVFVSRPALVNRVREKLYRLQKEPGWVTVFGMAGSGKSVLAAEAVRDHALITEC
FPGGVHWLSIGQLDRADLLVRIQSLCFRLEQQCQEQDPSSSLHRPPGSLEEAKERLRFLM
LRRYPRSLLILDDIWDSSVLKAFDIQCRVLLTTRDRSLADCVSGSKSEVAVESGLEEDQA
LEILALYVNGKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWAYYLRMLQQKKFK
RIRKSSSYDYDALDQAMAASIQVLSEEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEV
EDVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAEMNRSGLESLHSKVVRQYQQCYSQG
PPTSGDEECLYWFRFLTYHMAKANLTQELYSLMFSLDWVRTKAQIMGPAHLINDYVEYGA
ILDKENSEVRGHFQEFLSLNGHQLEQRPFPDVVQLALSQPDSSEVYRQALLQAQERASRG
GLYLDWVNKSSLKSLSRLVVQPHQGSIYSACFSHDGTKIASCGSSKTLRVFKSTSGEKLL
EIHAHDDEVLCCAFSSDDHLLATCSSDRKVKVWNVERGTLMRVFEDEHEEQVNHCQFTNT
RRRLLLATCSNDKFINTKLWNLNKPSSQNTMFGHSEPVNHCCFSPDDAHLSTSSSDGTLK
LWEVSSANEWKSIDVADMFPEQSEQTEVMVKCSTWSADGRSIICAARNAVFVFDVETAAM
LLEIRTSRLSTVQYCHACPSSNLVAIALSHYAVELWDIETNKKMADCSGHLSWVHGVQFS
PDGSLLLSCSDDQTVRVWETNKVHTSSAVCLKRDSDVLFNNGDVTVVAADNRNRLQVRNG
RTGAVMFQSEEQESRIRCTAICTQTSAVGLGREDGTIQVLEVPSGTPLATLQGHTRTVLH
CQFTPEGHTLITSSEDTTIRVWRWRTGECVVLEGHKEQVRCFSLLTTSPSSETHLLSWSF
DGTIKVWNMSSGERLQDLMCHQGAVLACDVSPDGQLFATTSADKTAKVWSSASWECVCPL
NGHQDCVRSCRFSWDGRCLATGDDNGEIRLWNVKDGTLLKICSRDNKDAMDSLHGGWVTD
LHFSPDNTVLLSTGGYIKWWNVEKGEALQTFYPTGANLKRIHVSPDFSTFVTIDNIGILY
ILKKVE
NT seq 3801 nt   +upstreamnt  +downstreamnt
atggcgatgatggaggaaggggcgcggagctgcctgcttcagtcacgctccaacctggag
caggacatcagggcctcctacctgatggatcacatgatcagcgatggcgtgctgacgggg
gacgaggaggagaggatcaggagtaagcccaccaggagagagcaggctgcggccctgctg
gagctgctcctgaggaaggataaccaggcctacatctccttctacaacgccctggtccgc
gagagctacggagacctggccagcctgctccacaacagcctgcccctggtctccccagag
gccgagaagagcttctcagacgcgggcacccactatgtccagacggtgctgagtgagggc
ggtgtgccccagagacccgtggtgtttgtgagccggccagccctggtgaaccgggtcagg
gagaagctctaccgattgcagaaggagcccggctgggtcactgtgttcggcatggccggc
tctggcaagtctgtcttggctgcggaggcagtccgagatcacgcactcatcacagagtgt
tttccaggaggagtccactggctgtccataggccagctggaccgggctgacctgctggtg
aggatccagtcgctgtgtttccgcctggagcagcagtgccaggagcaagacccctcgtcc
tccctccaccggcctcctggctctctggaggaggccaaggagcgcctacgcttcctcatg
ctccgtcgttaccccaggtcgttgctgatactggatgacatctgggacagctcggtgctc
aaggcctttgacatccagtgtcgagtactgctcaccacccgagacagaagcctagccgac
tgtgtcagtggttctaagtctgaggtggcagtggagagtggtctggaggaggatcaggcc
ttggagatcctcgccctgtatgtcaacgggaaaccccagagactcccagaacaggcccgc
agcattgtcagagagtgcaaaggctcccccttggtggtgtccctaatcggggccctgctg
cgggagttcccggaccgctgggcctactacctgcgcatgctccagcagaagaagttcaag
cgtatccgtaagtcgtcttcgtatgactacgatgcccttgaccaggccatggctgccagc
atccaggtcctgtctgaggaacacagggagctgtacattgacctcaccgtgctggagaag
gacgtcaaagtacctgccaaggttctgtcggttctgtgggatctagaaccggaggaggtg
gaggatgttctccaggactttgtgaacaagtccctactgttccgtgactgtcaccaccgg
ccctacctctactacctccacgacctccagctggacttcctggctgagatgaaccgctct
ggtctagagagcctccactctaaggttgtgcgccagtaccagcagtgctacagccagggt
ccccccacctcaggagatgaagagtgcctctactggttcagattcctcacctaccacatg
gccaaggccaacctcacacaggagttgtactctctgatgttctctctggactgggtcaga
actaaagctcagattatgggacctgctcatctcatcaatgactatgtggagtatggcgcc
atactggacaaagagaacagcgaggtgcggggccacttccaggagttcctgtctctgaac
ggccaccagttggagcagcgtccgttccctgacgtagtgcagctggccctgtcccagcca
gactcctccgaggtgtaccgccaggccctgctgcaggcgcaggagagggccagcagaggg
ggactctaccttgactgggtgaacaagagtagtcttaagagtctgtctcgtctggtggtc
cagccccaccagggatccatctactctgcctgcttctcccacgacggcaccaagatcgcc
tcctgtggctccagcaagacactgcgagtgtttaagagcacctctggggagaagctgctg
gagatccatgcccacgacgatgaggtgctctgctgcgccttctcctccgatgaccatctc
ctagcaacctgctccagcgataggaaggtcaaggtgtggaacgtggagcgtgggactctg
atgagggtgtttgaggacgaacacgaggagcaggtcaaccactgtcagttcaccaacaca
cgccgacgcctcctactggccacctgctccaacgacaagttcattaacaccaagctgtgg
aacctcaataaaccctcctcccagaacaccatgtttggtcattcggagcctgtcaatcac
tgctgtttctcccctgatgatgcccacctctccacctcttccagtgacggaaccctgaag
ctgtgggaggtgtcctcggccaatgagtggaagtccatagatgtggcggacatgttcccg
gagcagagtgagcagacggaggtcatggtgaagtgcagcacctggtcagcagacggcagg
agcatcatctgtgctgccaggaacgcagtctttgtgtttgacgtagagacggcggccatg
ttgttggagatccggaccagtcgtctgagcacggtgcagtactgtcacgcctgtcccagc
agcaacctggtggccatcgcactgtcacactatgctgtggagctgtgggacatagagacc
aataaaaagatggctgactgtagtggtcacctgagctgggtccacggagtccagttctcc
cccgatggatctctactgctctcctgctccgacgaccagaccgtcagggtgtgggagact
aacaaggtccacacatcctcggctgtctgtctgaagagggactctgacgtgctctttaac
aacggtgatgtcaccgtggtcgccgccgacaaccgcaacagactgcaggtgaggaatggg
aggacaggagcggtgatgttccagtcagaggagcaggagtctcgtatccgctgcactgct
atctgcacacagacctcagccgtggggctgggacgagaggatgggaccatacaggtgttg
gaggtgccgtcggggacccccctagccactctgcagggtcacaccaggacagtgctccac
tgccagttcaccccagagggacacacactgatcacctcctctgaggacaccaccatacgg
gtgtggaggtggaggacaggtgagtgtgtggtgctggagggccacaaggagcaggtcaga
tgcttctctctgctcaccacctcaccctcctcagagacacatctcctcagctggtccttt
gacggcaccatcaaggtgtggaacatgtctagtggtgaacggctgcaggacctaatgtgt
caccagggagcggtgctagcctgtgacgtgtcgcctgacggacagctcttcgccaccacc
tccgccgacaagaccgccaaggtgtggagcagtgcatcgtgggagtgtgtgtgcccgttg
aacggccaccaggactgtgtccgcagctgccgcttctcttgggacggccggtgcctagcg
accggcgacgacaacggagagatacggctgtggaacgtgaaggatggtactctgctaaag
atctgttcccgtgacaacaaagacgccatggactctctgcacggaggctgggtgactgac
ctgcacttctccccagacaacactgtgctgctgtctacaggaggatacattaagtggtgg
aatgtagagaaaggggaggcccttcagaccttctacccgacaggagccaatctgaagagg
atccacgtgtcacctgacttctccaccttcgtcaccatcgacaacatcggaatcctctac
atcctgaagaaggtggaatga

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