Coregonus clupeaformis (lake whitefish): 121549722
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Entry
121549722 CDS
T08357
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121549722
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121549722
04261 Adrenergic signaling in cardiomyocytes
121549722
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121549722
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121549722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_2
DUF2201
MCP-like_PDC_1
TMEM240
Motif
Other DBs
NCBI-GeneID:
121549722
NCBI-ProteinID:
XP_041717505
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MDTYSSFTALLLLLASLNSVSTVQFPSPLLIKEWVEQMQQELVTLTDTASGVQNLIQIFQ
SHRKYFSVGSNDASQLVANAAGNIEKLLANRSRALKTLASAAEDFQMRHRWKNDPEPDDI
HYYYAKENLDSNDTEVKKPNRLYPEFKEDEQFRRLISYNTTAVHIPTDIYEGSTIVLNEL
NWTDALEDVFRKNKEEDPTLLWQVFGSATGLARYFPASPWMDSRKTPNKIDLYDVRRRPW
YIQGAASPKDMLILVDASGSVSGLTLKLIHTSVNEMLETLSDDDYVNVVYFNDKAVKAAC
FQNLVQANVRNKRFLKDAVRNISAKGITNYKGGFELAFEQLSSLNVTQGRALCNKIIMLF
TDGGEERAQEIFQKYNADKKVRIFTFSVGQHNYDKGPIQWMACTNKGYYYEIPSIGAIRI
NTQEYLDVLGRPMVKANNKAKQVQWTNVYQDALELGLVITGTLPVFNKTNTKADKERGQQ
RPQNQLILGVMAIDVSLDDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLCPKNPKFQEP
VTLDFLDAELEDEIKVEIRTNMINGETGYRTVHTLVKSQDERYIDRSQRSYTYAPVKGTD
YSLALVLPAYSLHYIHTTIGDTITQAKLELGDEVSESLQEDKFEEYGYTLIAPREYCKDL
KPSKNNTEFLMDFNEYIDRKTPNNPLCNVDLVNRLLLDAGITSDLVKQWRDHMPNGVLAR
FVATDGGITRIYPKSAGLDWTEDPETYESSFYKRSLDNDIYIFTPTPYQEDTNMTEDSVL
VSRAVNLDIDGVRLKPAVVGVKLDINTWMTNFINATLKMNCKDEICGCQRNDEHVDCVIL
DDGGFLVMANRDEYISQIGQFFGMIDPILMVNLVNMSLFTLNKTYDYQSVCDPKRESKGS
AAGLRSVYVPTIADILNVGWLASAAAWSILQQLLVSITFPSFLHAADTDDDIPDMSKESC
ITEQTQYFYDNDEKSFRGTLDCENCSRMFHAEKLWKTNLVFVIADAKLTCMSCDPKPLIQ
AEQPSEGPDPCEMAEKPRFRKGPDACFDNNEREEDFDCGGASALSPSLLAMVALQLALLW
LLASSTHHAVPS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggatacctacagctccttcaccgctctgcttttacttctggcttcgttaaatagtgtg
tcaaccgtgcagttcccgtcgccacttctgataaaggaatgggtggagcagatgcagcag
gagctggtcacactgacggacacagccagcggagtgcagaacctcatacagatcttccag
agccacaggaaatacttcagtgtggggtccaacgatgccagccagctggtggctaacgca
gcgggtaacatcgagaagctcctggccaaccgttctcgtgctctcaagacactggcatcc
gctgcagaggattttcagatgcggcatcggtggaagaacgatcctgagccggatgacatt
cattactactatgccaaagaaaacctggactcaaatgatacagaggtcaagaagccaaac
cggctttatccagagtttaaggaagacgagcaatttagacgactcatctcctacaacacc
acggcagtccacatacccacagacatatacgagggctccaccattgtgctgaatgagctg
aactggacagacgcattagaggacgtgtttaggaagaacaaggaagaggatcctactctc
ctgtggcaggtgttcggcagcgccaccggattggctcgctacttcccagcatccccttgg
atggactcgcgaaaaacgcccaataagattgacctctacgacgtccggcggcgaccgtgg
tacatccagggggcggcgtcacctaaggacatgctgatcctagtggatgcgagtggcagt
gtctctggcctcaccctcaagctaatccacacctctgtcaacgagatgctggagaccctg
tcggacgatgactacgtcaatgtggtctatttcaatgataaagcggtgaaggcggcgtgc
tttcagaacctggtccaggccaacgtgaggaacaagaggttcctgaaggatgctgtgcgg
aacatctcagccaagggcatcaccaactacaagggcggctttgagttggccttcgagcag
ctctcatcgttgaacgtgacccagggcagggcgttgtgtaacaagatcatcatgctgttc
actgacggaggagaggagcgggcccaggagatcttccagaagtataacgctgacaagaag
gtgcggatattcacattctcagtgggccaacacaactatgacaaaggaccaatccagtgg
atggcctgcaccaacaaagggtactactatgaaatcccctccatcggtgctatcaggatc
aacactcaggagtacctggatgtactgggcagacccatggtcaaagcaaacaacaaggcc
aagcaggttcagtggaccaacgtttaccaggacgctctggaactaggtctggtgatcaca
ggaacactgcccgttttcaacaagaccaacaccaaagctgacaaagagaggggacaacag
aggccccaaaaccagctgatcctgggagtgatggctatcgacgtgtctctggacgacatc
aaaagactaacgccgagatttacatttggaccaaatggctattactttgccattgacccc
aacggttacgtcttgctgcatcccaacctctgcccaaagaaccctaagttccaggagcct
gttactctggacttcctggacgctgagctggaggatgagattaaagtagagataagaacg
aacatgattaatggagaaactggctaccgcaccgtacacacactagtgaagtcccaggat
gagcggtacatagaccgaagccaaagatcgtacacatatgcccctgtaaagggtacagat
tacagtctagccttggtccttccagcgtacagcctgcattatatccatactactattgga
gacaccatcacccaggccaaattggaattgggggatgaggtctctgaaagcctgcaggaa
gacaagtttgaggagtatggatacactctcattgcaccaagggagtactgtaaggatctg
aagccgtctaaaaacaacacagagttcctgatggacttcaacgagtacatcgacaggaag
actcccaacaatccactgtgcaatgtggatctggtgaacagattgttgctggacgctggg
atcacgtcagacctcgtcaagcagtggagagatcatatgccaaatggagtcctggccaga
tttgtggccactgatggaggaatcactcgcatttatcccaaaagtgctggactagactgg
acagaggacccagagacgtacgagtcaagcttctataagaggagtctggacaatgacatc
tacatcttcacacccacaccctaccaggaggacaccaacatgactgaggactcagtcctg
gtgagcagagcagtgaatctggacattgatggagtcagactcaaaccagcagttgtggga
gtgaaactggacatcaatacctggatgaccaacttcatcaatgctactctgaagatgaac
tgtaaggacgagatctgtggttgtcagaggaatgatgagcatgtggactgtgtcatcctg
gatgatgggggattcctggtcatggccaatcgggatgaatacatcagtcagatcggccag
ttcttcgggatgatcgaccctatcctcatggtcaacctggtcaacatgtctctgttcacg
ctcaacaagacgtacgactaccagtcggtctgcgaccccaagagggagagcaaggggtcc
gcggcgggcctgcgctcagtctacgtgcccaccatagcagacattttgaacgttggatgg
ttagcatcagcagcagcctggtcgatactacaacagttgttggttagcataacgttccct
agtttcctgcacgcagcggacaccgatgacgatatacctgacatgtccaaggagagctgt
atcacggagcagactcaatacttctatgacaacgacgaaaagtccttcagaggaacgcta
gactgtgaaaactgctccaggatgttccatgctgagaagctgtggaagaccaacctggtg
ttcgtcatcgccgacgccaagctcacctgcatgtcatgtgaccccaagcccttaatacag
gccgagcagccttctgagggaccagacccatgtgaaatggctgagaaacccaggttccgg
aaaggtccagatgcctgtttcgacaacaacgagagggaggaggactttgactgtggtggg
gcgtccgctctgagcccttccctgctggccatggtggcgctgcagctggccctgctctgg
ctcctggccagctcgacgcaccacgctgtcccctcgtga
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