Coregonus clupeaformis (lake whitefish): 121550078
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Entry
121550078 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: suppressor of cytokine signaling 6-like
KO
K04699
suppressor of cytokine signaling 6/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121550078
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121550078
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Gene cluster
GFIT
Motif
Pfam:
SH2
SOCS_box
Motif
Other DBs
NCBI-GeneID:
121550078
NCBI-ProteinID:
XP_041718137
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Position
34:complement(43588478..43593902)
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AA seq
611 aa
AA seq
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MTSCLQPDGRTLWIAAPSSGPQEESSHPVQVSCPTPLPCQGGPFRMKKISLKTIRKSLNI
NKGKEEGGGDFVMLQQPSLAADFSKEDALFGGCYNKDLAGCDLGGGGGGVEEEDKAGHNK
GRSKSESLMGSLKRRLSAKQKAKVKGGSTAMGSADDDDTFSSSSVPISFNEVKAQRPLRS
ASLRSHHYSPSPWPLRPVNSDEACIKMEVKAKAMVHSPSPSPNLNGVRKDFHHQGFQMEG
IFHEQAVKNLQEQAESLKNLQQPQNGDQLHLNIDEHVPVVLGLTPQDYIQYTMPLEEGMY
PEGSHSVSHSFCLEGSLPMEVVTEADSSSLHLHADHQSQEDQDLVSMNLNLSADLFMESV
NGLLIGSNGVMLQSSRDRVDATTPPLSPLLPLLSSNEIPRTCSGFSGVDIHVAERVRHHL
NFDPNSAPGVSRVYDSVQSSGPMVVTSLTEELKKLARQGWYWGPITRWEAEEKLVNLPDG
SFLVRDSSDDRYLLSLSFRSQTKTLHTRIEHSNGRFSFYEQPDVEGHTSIVDLIEYSIKD
SENGAFCYSRSRLPGSATYPVRLTNPVSRFMQVRSLQYLCRFVIRQYTRIDLIQNLPLPN
KMKDYLQEKHY
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaccagctgtctccagcctgatgggaggactctgtggatagcagcaccttcatcagga
ccccaggaggagagcagccatcccgtccaagtctcatgccccacgcccctcccctgccaa
ggagggccgttcagaatgaagaaaatcagccttaagaccatccgcaagtccctcaacatc
aacaaaggcaaggaagaaggagggggggattttgtcatgctccagcagccctcgctagcg
gccgacttctccaaggaggacgctcttttcgggggctgctacaacaaagacctggcgggc
tgcgacctgggaggtggtggtggaggagtggaagaagaggataaggcgggacacaacaag
ggccgttctaagagcgagagcctgatgggttctctgaagaggaggctgtcggccaagcag
aaggccaaagtcaaagggggctccacagccatggggtcagctgatgacgacgataccttt
tcctcctcctctgtgcccatcagcttcaacgaggtcaaggcccagcggccgttacgatcg
gcatccctccgcagccaccattacagcccctctccctggcccctgcggcctgtgaactca
gacgaggcctgcatcaagatggaggtgaaagctaaagccatggtccactccccgagcccc
agcccaaacctgaatggcgtgcggaaggatttccaccaccagggtttccagatggagggc
atcttccatgagcaggccgtgaagaacctccaggagcaggccgagtccctgaagaacctc
cagcagccccagaatggagaccagctgcacctgaacattgacgaacacgtgcctgtagtc
ctgggcctcacgccgcaggactacatccagtacaccatgcctttagaggagggaatgtac
ccagaggggtcccactctgtctcccactccttctgcctagaggggtccttgcccatggag
gtggtgactgaggcggacagtagctctctccacctccacgctgaccaccagagtcaggaa
gaccaggatctggtgagtatgaacctgaacctgtcggcggacctcttcatggagtctgtg
aatggcctcctcatcggctctaatggggtgatgctccagagctccagggacagggtcgat
gccacaacaccccccctctctcccctcctgcccctgctatccagcaacgagatccccagg
acttgctccgggttcagtggggtggacatccacgtggcggagcgggtgaggcaccacttg
aactttgaccctaactctgctccgggcgtgagccgggtgtatgactcagtccagagcagc
gggcccatggtggtgaccagcctgactgaggagctgaagaagctagccaggcagggttgg
tactgggggcccatcacacgctgggaggctgaggagaagctggtcaacctgcccgacggt
tcattcctggtcagggacagctcggacgataggtacctcctcagccttagtttccgctcc
cagaccaagaccctccacacccgcatcgaacactccaacggacgcttcagcttctacgag
cagcccgacgtggagggacacacgtccatcgtggacctgattgaatactccatcaaagat
tcggagaacggagccttctgttattctagatctcgcttaccagggtccgccacctacccc
gtcaggctgaccaatcccgtgtctcggtttatgcaagtgcgctccctgcagtacctatgt
cggttcgtgatcagacagtacaccaggattgacctgattcagaacttgcctttgcccaac
aagatgaaagactacctgcaggagaagcactactga
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