Coregonus clupeaformis (lake whitefish): 121550221
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Entry
121550221 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121550221
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121550221
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121550221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
TPR_1
zf-rbx1
TPR_2
zf-C3HC4
TPR_16
TPR_11
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
TPR_17
zf-RING_11
ANAPC3
zf_RING_Vps8_fungal
TPR_19
Prok-RING_1
TPR_9
zf-RING_Vps41
TPR_8
Motif
Other DBs
NCBI-GeneID:
121550221
NCBI-ProteinID:
XP_041718313
LinkDB
All DBs
Position
35:complement(7065387..7100416)
Genome browser
AA seq
1907 aa
AA seq
DB search
MSDSDSGPEFVDCDIRHGAKLIYDIDSPFVALQPPDVIYERWNKIPVILKKKAAQLMQLC
AFWYHILLRQENHNTTRWAVQVGFLDSNVSNDLSLKRLHKIEILEAILRAMEKGCLLEDQ
TRHMIWISNKFNLHVPEVLDEAIHWLERTGEPRIKQRVEELGPRGNCFAALQLIFTEYSH
YTQAMGVNRKKMMRELAQGPCQWSIEKSEEMKTRGNDQFQKKKYDAAVKCYSKAIKYHPE
NHIIYGNRALCYIRSEKYLKAVGDGKRATLIQPEWAKGHYRYCEALFLLGEHKRAIEANE
WGQTLCKADSEGMKDLLQQYAKFNIEIEESKRHQAEERKVGRLNKTAAKKVSSRRTESTT
RADTTESQQQTAKPTSKVEPSTKNTAPENKGSEVKVESQTQPVKGAGRAHSVDNNTKAPK
ETKGEMADKKISKPEPSASEKSKGKSRNKQSKEKTVSGSSRDPSVRDALVSAVQEAHTAL
TDQRCRNAEQAFSQALSILETSTPKELGLCALDQVVLIYGHASALIEIGQPEELAEAQRD
FEKIKTFEERKFQCLVFYGIGKAYQKENRFPLALEQFSDSMQMVKKKITPGKLTWPTTKV
IVEETKPGYFKELLEESIEMCKFPPKPDAICLHQNCHGHSKIEIYFTDPDFKGFIRMVCC
QSCKVEYHISCWKKLKATAFSDKNEKDFLQEMCFTPDCLGRICHIKIYGSTGLVKCEFEA
SIEKLVGTATLRVNQKCTSLKKLKSKEDRKLRRKQHRQDASLSTQDKNDQIPLENGETIV
VGQKASSPTWLAYGDRVLLQISESKDLFRDESHNISVLMENLKPWMDLDRIKGNELGTSY
AGRQPETLGDVVALLLERKNRVWARVFIHSLSGCLDTSPKLHNWAHQLNSAGLNSAGLFI
DRYADHLEQLDLAPLLNFAPLQDMLIEKFGTMPEFFSSQGLTLTEYLKQAPPQEMRLFIW
TLEEHRDQYTTCHTVLDYYFEIMDGDCLVIKKTGIENEINSPIKTRNRNRKKKQKEPKGS
VIVLSGMRGGTSREEDEEDFLDDSLMFFDSSDPFSIPDHLRNQVAEFEGQYNNGSRSSHY
NRILDNNPDPTKESLYDYFAQILEEYGPLGAQDPLLVGELNNFPSDAQQKIQEAGGLEPF
LLESLRFVRTDNLLGLMKHAVSLQDANTHRMDDLDFIGDIPNGLSLNPSAMEFLPNSHDS
GPRDYDEEPFANIHVQPNLVEVCGYLQGMPTLPSPYIFPAFGSQAAPPANGIAGAIETLR
AEDKSYNNHDPDNLEDFDLDIRDVDEQGLLEAVYAPVRGAKAPGKTTVEVQVLTCDTLSE
VAVNTEPYEPFEGNNGDMNKKEKSNAEFEQQIQQMVQDYGAVKQRRQKEISALEGEQEEI
NHSIQVTHKELGLFQQKLEEEVKKDQQEKKDNQEILKALKTEIKELAESQESISKNIHEK
NKEYETQLNNFLVLSNQSAAEKMSLEDEIKRCRDLCAKATRRSRGAELSKLENRRSRGLR
CLYRSLSDARAILAKLKEVAPRFPSQILQSATDAWIACVQEAEEKIHSTEAQYQDQIEQV
KRGTRLCTLPPVAVPSAPRPPPVPICSVPEEDPSLVPLCLPYPVPSIGPPPGLSFPLVAP
GLRYSAGFTQQAEHVLGLHFPIRGSLGPEQMLFPPQVHQQLPCHPVHIRVPLYGHLGLPR
APLAPAMAQNVALPSSMAGAPTSATTNHPITRPPQQNQASRPQAPQPTNVYDRIVDRLSV
MFPHYSRPVLSKFIGEMRTANRGCLNSLSYQEVINRVAQLILDHQDSTREQLSSAGRGDT
AGTPSRSDSPGSVHSTGPHVWKSVGAQGHSKSKALNMEDPCIICHDDMSQEDLCVLECRH
SFHTECIKSWLKEQSTCPTCREHALLPEDFPLLPGRIRRGHTPAAFS
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcagactccggtccagagtttgtggactgcgacatcagacacggggcgaaa
cttatctatgacatagacagtccctttgtagccctacaacctccagatgttatatatgag
cgatggaataaaatccctgtcattttgaaaaagaaggcggcccagttgatgcaattgtgt
gccttttggtaccacattctgctgcgtcaagagaatcacaacaccacacgctgggctgtt
caagtgggcttcctagactcaaacgtcagcaatgacttgagtctgaagagactgcacaag
atagaaatattggaagctatcctcagagcgatggaaaaaggatgtttattagaagatcaa
acaaggcatatgatctggataagcaataaatttaacttgcatgtgccagaggtcctggac
gaagcgatacactggctggagcggacaggagagccccgcatcaagcagcgggttgaggag
ctgggccccagagggaactgctttgccgccctgcagctcatcttcactgagtattcccac
tatacacaggctatgggagtcaacagaaaaaaaatgatgcgagagcttgcacagggcccc
tgccaatggtctattgagaaaagtgaagagatgaagactagaggaaatgatcaatttcag
aaaaagaaatatgatgcagcagtcaagtgttactcaaaagccatcaaatatcaccctgaa
aaccacattatctatgggaaccgagcgctttgctatatccgtagtgaaaaatatctaaaa
gctgttggtgatggaaaacgagccactttaatacaaccagagtgggcaaagggtcactac
cggtactgtgaggcgctgttcctcctgggggaacacaagcgggcgatagaggccaacgag
tggggccagaccctgtgcaaggctgactcagagggcatgaaggacctgctgcagcaatat
gccaagttcaacatagagatcgaggagagcaagcgccaccaggcagaggaacgcaaagtt
ggaagactgaataaaactgcagctaagaaagtttcaagtagaagaacagagagtaccacc
agagcagacacaacagagtcacaacaacagactgctaaacccaccagtaaggttgagcct
tccactaaaaacactgctcctgagaacaagggctcagaagtcaaggtggaaagccagaca
caaccagtgaaaggtgcaggaagagcacattcggtggataataataccaaggcgcctaaa
gagacgaaaggtgaaatggctgataaaaagatcagcaagccagagcccagcgcttcagag
aaatcgaaagggaagagcagaaacaagcagtcaaaggaaaagacggtatcaggcagctcc
agagaccccagtgtgcgggatgcactggtgtcagctgtgcaggaagcccacacggccctg
accgaccagcgctgccgcaatgcagagcaggccttctcccaggcccttagcatcctggag
accagcacaccaaaggaacttggcctctgtgctcttgaccaagttgtgctgatttatggc
catgcctcagcactcatagagattggtcaacctgaggaacttgctgaagctcaaagagac
tttgaaaagatcaaaacctttgaagagaggaagtttcagtgtctggttttttacggcatt
ggaaaggcgtatcagaaggagaaccgatttccacttgctctggaacagttttctgattct
atgcaaatggttaagaaaaagataacacctggtaaactgacctggcccaccacaaaagtt
attgttgaggaaactaagccgggctatttcaaggagctgctagaggaatccatagagatg
tgcaaatttccacctaaaccagatgccatttgtctgcatcagaattgccacggacattcc
aaaatagaaatctacttcacagatccagattttaagggtttcattcggatggtttgctgc
caaagctgcaaagttgagtaccatatcagctgttggaagaagttgaaagcaacagcattc
tctgataagaatgaaaaggatttcctgcaggaaatgtgctttactccagactgtttgggt
agaatctgtcatattaaaatctatggttcaacagggcttgtcaaatgtgagtttgaagca
tctattgagaaacttgtgggtacagcaacattgagagtaaatcagaaatgtacaagtctc
aagaagttgaaatccaaagaggatcgtaaactcaggcggaagcaacataggcaagatgct
tctttgtctacgcaagacaagaatgatcagatacctttggagaacggggagacaattgtc
gttggacagaaggcttcatcccccacctggctagcttacggggaccgtgttctgcttcag
atcagtgagagtaaagacctattcagggacgagagccacaacatctctgtcctgatggag
aaccttaagccatggatggacctagaccggatcaaggggaatgagctgggcacgtcgtac
gctgggaggcagccggagacgctgggggacgttgtagcgcttctcctggaaaggaagaac
cgggtgtgggcccgcgtatttatccatagcctgagcggctgcctggacaccagccccaag
ctgcacaactgggcccaccaactgaacagcgcaggtctgaattcagctggactgttcatt
gaccgctatgcagaccacctggagcagctcgacctcgctcctttgctaaattttgccccc
ctgcaggacatgctcatagagaagtttgggactatgcctgagttttttagcagccaaggg
ttgactctaacggagtacctaaagcaggcccctccccaggaaatgaggctgtttatctgg
actctggaggagcacagagaccagtacaccacctgccacactgtgctggattactatttt
gaaataatggatggggattgtttagtgattaaaaagacagggattgaaaatgaaattaat
tcccctattaagactaggaacagaaaccgcaaaaagaagcagaaggagccaaaggggtcg
gttattgtgctgtcgggaatgagaggtggtacctcaagagaggaggacgaagaggatttt
ttagacgactctttaatgttctttgactccagtgacccattcagcattcccgatcatctt
cgaaatcaggtggcagagtttgagggacagtacaacaatggcagccgcagtagccactac
aatagaatattggacaacaaccccgacccgactaaggagagtttgtacgactactttgcc
cagatcctggaggagtacggtcccctaggggcccaggaccccttgctggtgggtgagctg
aacaacttcccctctgacgcccagcagaagatccaggaggcaggcggccttgagcccttc
cttctcgagtcgctgcgcttcgtcaggactgacaacctcctgggcctcatgaagcacgct
gtgtcactgcaggatgccaacactcacagaatggacgatctggacttcataggggatatc
cccaatggactctctctaaacccttctgctatggagttcctcccaaactctcatgactct
ggacctagggattatgatgaagagccttttgccaacattcatgtgcagcctaacctggtt
gaagtctgtggctatcttcaagggatgcccactctccccagcccgtatattttccctgcc
tttggctctcaagctgccccacctgccaacggaatagcaggtgccattgaaactctgaga
gcggaggacaagtcatataataaccatgatccggataaccttgaggattttgaccttgat
attagagacgtggatgaacagggattgttggaggctgtttatgctcccgttcgcggtgcc
aaggcacctggaaagactacagtggaagtacaggtattaacttgtgacaccttgagtgaa
gtggctgttaacacagagccttatgagccttttgaagggaataatggagacatgaacaag
aaagagaagagtaatgcagagtttgaacagcagatccagcaaatggtgcaggattacggc
gctgtgaagcaaagacgccaaaaggagatatctgccctagaaggagagcaagaggaaatc
aaccattcaatacaggtcacccataaagagctgggcttgttccagcagaagctggaggag
gaggtgaagaaggaccaacaggagaagaaagataatcaggaaatactgaaggccttaaag
actgagataaaggagctggcggagtcacaggagagcatttctaagaacatccacgagaag
aacaaggagtatgagacacagctgaataatttcctggtgctgagtaaccagtcagctgct
gagaagatgagcctggaggatgagatcaagcggtgcagagacctgtgtgccaaggcaact
aggaggtctcggggagcagagctgtctaaattggagaaccggcgtagccgcggactgcgc
tgcctctacaggtctctgtctgatgccagggccatcctggccaaactcaaggaagtggct
cccagattcccttcccaaattctccagtcagccacagatgcttggatagcatgtgttcaa
gaagcagaggagaaaatccactcaactgaggcacagtaccaggatcagatagaacaggtg
aagagggggaccaggctgtgcactctgcccccagttgcagtccccagcgccccccggccc
ccacctgtaccgatctgctctgtcccagaggaagacccatccctggtacccctctgcctc
ccctaccccgtcccctccattggccctcccccgggcctgagctttcccctagtggcgcca
ggcttgagatacagtgcaggcttcacacagcaggcagaacatgttctggggctccacttc
cccatcagagggtccctggggccagagcagatgctgttcccaccccaggttcaccagcag
ctcccttgccacccagtgcacataagagtccccctctatggtcacctggggttgcctaga
gcccctctggccccagccatggctcagaatgttgcactgccctccagtatggctggagct
ccaactagtgctaccactaaccatcctatcacgaggccacctcagcagaaccaggcttcc
aggccacaggccccacagcccacaaatgtgtacgatagaatcgtagaccggctcagcgtc
atgttccctcactatagcaggcctgtgctgtccaagttcattggggagatgcgcacggcc
aacagaggctgcctgaactccctgtcctaccaggaggtcatcaacagagtggcccagctt
atcctggaccaccaggactccaccagggagcagctgagcagtgcaggtagaggtgacact
gctgggaccccttcgcgctccgactcaccaggctccgtccactccaccggaccccacgtc
tggaagagcgtgggtgcccaaggacactccaagtcgaaggcgttgaacatggaggatccc
tgtatcatctgccatgatgacatgtcccaggaggacttgtgtgtgctggagtgcagacat
agcttccacacagagtgtattaagtcgtggctgaaggagcagagcacctgtcccacctgc
agagagcatgctctcctgcccgaggacttccctctgctgcccggcagaatacgcaggggc
cacacgcctgctgccttctcttaa
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integrated database retrieval system
