Coregonus clupeaformis (lake whitefish): 121550302
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Entry
121550302 CDS
T08357
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5 isoform X1
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121550302
Ion channels [BR:
cclu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121550302
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GFIT
Motif
Pfam:
LSDAT_euk
Ion_trans
LSDAT_prok
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
121550302
NCBI-ProteinID:
XP_041718447
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All DBs
Position
35:13549771..13628219
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AA seq
1069 aa
AA seq
DB search
MQRRPPPCPRRKSSLWAWPLGGWCTTDSASSTHGFPARYYVQNTSHDSCSLDSNYQAFLL
VDDGSVGRRGGEMAFWAKMEDYISHQRTGIWGSGSIDVPVLCMLISGEAAMLERVDLSLK
KATPWLVLNGSGPAADLICELLDALSAMPMSPTSPLQEGEGSESPSAELRDRARERVRRH
FTAEADLEKLVDRALSIYQNRDLITVFHGEQEGPDDFDTVLLKALVRASKRVSSDASEYT
EELKLAVAWNRVDIAKSELFNGDIKWRYEDLEDSMTDALINDKPQFVRLFTENGLNILHY
LTYRRLEGLYRSLSDSSLAYTLLQRRLTERQGLAESLPTVPCSTDSPSPLKSPISGPSSA
KELSLYEVSRLLWDILGDVCEPFYYSLLGLDQSTSTRRAMKHMNKLLLGECPYKEQSCLS
PWASLFIWAVLQNRSEMAVYFWEMAGESVHSALAGCRMLRELSKLESETETKLSMNVLAQ
KFENLAHDVFSECYQSSENRSFTLLIRKSPVWGGATCLQMATAADARLFFSHDGVQSLLS
QIWWGDMERSTEVWKLVLTFFLPPLIYTNLITFREQEEEEGKSEEVTHGRDTDSLDGGDA
TVFPLADIMQTEEDAEEYAALRAKLKGASNPKRPFVLMRWREFWFAPVTSFLGNVLMYFL
FLALFAYILLVDFKPPPPHGPSTLEFVLYFWVFTLVCEEFRQTFFVGSNTIYQRMNLYIQ
DMWNKCDITAISLFALGTCCRMFPWSYEFGRAVLAVDYMVFTLRLIHIFAIHKQLGPKII
IVGNMMKDIFFFLFFLAVWLMAYGVANQVLLYSYDPRPNWIFRRVFYRPYLHIFGQIPIH
EMDADKLEEGRECTNNATLIEAGAEPCISTYANWLVVILLVIYLLVTNILLVNLLIAMFS
HTFSKVQEHSDTYWKFQRYNLIMEYHSKPCLAPPFIIISHLHLFIKRQIRKIPSTKIKHF
VLEIRGKQARKLNMWEAIQKENILSAQNKRERESDSERLKHTSVKMDSVLKQMAEIRDHD
RRLRMLETKLEYCSSALSWMVDALSQSNLIKPTRPPPTLRDLTPLSPTN
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggcctcctccctgtcccagaagaaagtcatcgctgtgggcgtggcccctt
gggggttggtgcacaacagacagcgcctcatcaacgcacggttttccagcgcggtattat
gtccagaacacgtcccatgattcgtgctccctggatagtaactaccaggccttcctgctg
gtggatgatgggagtgtaggccggcggggaggggaaatggccttctgggccaagatggag
gactacatctcccaccaacgcacaggcatctggggtagtggcagtatagatgtccctgta
ttgtgtatgctcatctcaggggaagctgccatgctggagagggtggatctctctctgaag
aaggctactccctggctggtgttgaatggttctggtccagcggcggatctcatctgtgag
ctgctggatgccctgtcagccatgcccatgagccccacctctcccctgcaggagggtgag
gggagcgagagccccagtgcggagctgcgtgacagggcccgtgagagggtccggaggcac
ttcactgccgaggcagacctggagaagctggtggacagggctctgagtatctatcagaac
agagatcttataacagtgttccacggggagcaggagggtcctgatgattttgacacagtg
ctactgaaggctctcgtcagagctagtaaacgtgtgtcaagtgatgccagtgagtacaca
gaggagctgaagctagcagtagcctggaacagggtggacatcgctaagagtgaactcttc
aacggagacatcaaatggaggtacgaggacctagaggattccatgacggacgcgctgatc
aacgacaagccccagttcgtgcgtctcttcactgagaacggcctcaacatcctgcactac
ctgacataccggcgtctggagggcctgtaccgctcgctatccgacagttctctggcctac
acgctgctccagcgccgcctcacagagaggcagggcctggccgagtccctgcccaccgtc
ccctgctctacggacagcccctcgcccctcaagagccccatatcaggaccctcgtcggcc
aaagagctcagcttgtatgaggtgtcacggcttctatgggacatcctgggagatgtgtgt
gagcccttctactacagccttctgggtttggaccagagcaccagcaccaggagagcaatg
aagcacatgaataagttgttgctgggggagtgtccgtacaaggagcagagctgcctctct
ccctgggcctctctgttcatctgggctgtgcttcagaaccgcagcgagatggcagtctac
ttctgggagatggctggggagtctgtccacagtgctctggcaggctgtaggatgctgagg
gagctgtctaagctggagagtgagacggagaccaagctctctatgaacgtgctagcccag
aagtttgagaacttggcccatgacgtgttcagtgagtgctaccagagcagtgaaaaccgc
tccttcaccctccttataaggaagtctccggtgtggggcggagctacctgtctgcagatg
gccaccgcagctgatgcccgcctcttcttcagccatgacggcgtgcagtctctgctgtct
cagatctggtggggagacatggagaggagcacggaggtctggaaactggtcctcaccttc
ttcttaccccccctcatctacaccaacctcatcactttcagggaacaggaggaggaggag
gggaagtcggaggaggtgactcatggtcgagacacagacagtctggatggaggagatgcc
accgtgttccctctcgccgacatcatgcaaacggaagaggatgctgaggaatatgctgct
ttaagggccaaactgaaaggtgcctccaatcccaagaggcccttcgtactgatgcgctgg
agggagttctggtttgcgcccgtcacctcgttcctaggcaacgtgctgatgtacttcctg
ttcctcgccctgtttgcttacatcctattggtggacttcaagcccccgccccctcacggc
ccatccaccttagagtttgttctctacttctgggtcttcaccctggtctgtgaggagttt
cgacagacgttcttcgtgggcagcaacactatatatcagaggatgaatctctacatccag
gacatgtggaataagtgtgacatcacggccatctcactctttgccctgggtacgtgctgc
agaatgttcccgtggtcctatgagtttggccgtgctgtgttggctgtggactacatggtg
tttaccctccgtctcatccacatcttcgccatccacaaacagctgggacccaagatcatc
atcgtcggcaacatgatgaaggacatcttcttcttcctcttcttcctggcggtgtggctc
atggcttatggtgtagccaatcaggtgctgctctactcctatgacccccgtcccaattgg
atatttcgcagagtgttctacaggccatacctgcacatatttggacagatccccatacac
gaaatggatgctgataaactggaggaggggagagagtgcaccaataacgccaccctgatt
gaggcgggggcagagccctgcataagtacctacgccaactggctggtggtcatcctactg
gtcatttacctgctggtcaccaacatcctcctggtcaatctgctcatcgccatgttcagt
catacgttctccaaagtgcaggagcacagcgacacctactggaagttccagcgctacaat
ctgatcatggagtaccattccaaaccctgtctggcaccacccttcatcatcatctcccac
ctccacctcttcatcaagagacaaatccgcaagatcccctccacaaagatcaaacacttt
gttcttgagatacgtggtaagcaggccaggaaactgaacatgtgggaggccatccagaag
gagaatatactgtctgcccagaacaaacgagagagagagagcgactcagagagactcaaa
catacctccgtcaagatggacagtgtcttaaagcagatggcagagatccgggaccacgac
cgcaggctgagaatgctggagaccaagttggagtactgttctagtgccctgtcctggatg
gtggacgctctctctcagagtaacttgatcaaacccacacgtcctccgcccactctcaga
gatctgacccctctctctccaactaactga
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integrated database retrieval system
