Coregonus clupeaformis (lake whitefish): 121551859
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Entry
121551859 CDS
T08357
Name
(RefSeq) platelet-derived growth factor subunit A-like
KO
K04359
platelet-derived growth factor subunit A
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04020
Calcium signaling pathway
cclu04510
Focal adhesion
cclu04540
Gap junction
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121551859
04020 Calcium signaling pathway
121551859
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121551859
04540 Gap junction
121551859
09142 Cell motility
04810 Regulation of actin cytoskeleton
121551859
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121551859
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121551859
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Growth factors (RTK binding)
121551859
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
121551859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
121551859
NCBI-ProteinID:
XP_045081428
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Position
16:complement(157988..188418)
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AA seq
205 aa
AA seq
DB search
MRPVLCYFLLCTSYLLNAVAEEVPQELIERLSHSEIHSISDLQRLLDSEIDSPEGVENEV
IEETKLIQKHHKNYSQQHGYSDLKSSQIHSRRKRSVEEAVPAVCKTRTVIYEIPRSQVDP
TAANFLIWPPCVEVKRCTGCCNTSNMRCHPSRRHHRTVKVAKVEYVRRKPKLKEVLVRLE
DHLECVCTSQHHVTEHSDADTVDIR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgagacccgtactttgctacttcctgctctgtacgtcgtacctgctgaatgctgttgct
gaggaagtcccacaggagttgatagagagactgtcccacagcgaaatccacagcatcagc
gacctccagcggttattggactccgagatagactcccccgaaggtgtggaaaatgaggtc
atcgaggagaccaagctgatacagaagcatcataagaactactcccaacagcacggctat
tcagacctgaagagctcacagatacacagccgacgcaagaggagcgtcgaggaggcggtg
cctgcggtgtgtaagacacggacggtgatctatgagatcccgcgcagccaggtggacccc
acggccgccaacttcctgatatggccgccgtgcgtggaggtcaagaggtgcacgggatgc
tgcaacaccagcaacatgcgctgccacccctcgcgcaggcaccaccgcactgttaaggtg
gccaaggtggagtatgtgcggaggaaacccaagctcaaggaggtcttggtcaggttagaa
gaccacctggagtgtgtgtgcacgtcacaacatcacgtgacggagcactcagacgcagac
acagtggacataaggtga
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