Coregonus clupeaformis (lake whitefish): 121552802
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Entry
121552802 CDS
T08357
Name
(RefSeq) thyrotropin receptor-like
KO
K04249
thyrotropin receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121552802
04081 Hormone signaling
121552802
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121552802
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Peptide
Thyrotropin
121552802
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
Comm
Motif
Other DBs
NCBI-GeneID:
121552802
NCBI-ProteinID:
XP_041721781
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Position
36:15443355..15489857
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AA seq
819 aa
AA seq
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MTENDRHRLQVITCALFTLFTLPIKTLGDSDSCPTDCECSEWKTYTISCFDIDVIPTFPA
STETIWLLETRLTSVPGDVFSNLVNISRIYISVDVTLAGLERHSFYNLKKITHIEIRNAK
SLSYIDPEAFKNLPNLKYLGIFNTGLTIFPNLTNIHSDDMNFILEIADHPYISEVPANSF
CGITNQVLTVMLYSNGFTDIQHHAFNGTKLDAVYLHRNKRLTKMDERMFAGTVSGPMLLD
VSLTGVSSLPTAGLESLRELMARSAWNLKKLPPIKTFKHLITADLTYPSHCCGFKNLKKK
RGYLEYIICNLTAFYDQHQKRSVDPLRVPSLQVGPASDAAADQQQKRSVGPLTVPSLQGD
PMGDAADQQPIEGGFRDEVFRDIQGDPRRDFHSSLHYHAYFGGQPDDDVGFGETLKNPQE
DTSQDFDSRYDYVVCEEGEEVTCAPAPDEFNPCEDIMGFSFLRVSVWFVSLLAVVGNMVA
LLVLLTSHYKLSVSRFLMCHLAFADLCMGIYLLLIASVDLHTRAEYYNHAIDWQTGPGCG
LAGFFTVFASELSVYTLTVITLERWHAITFAMRLDRKLRLPHAAAVMLAGWLFCLLLAVL
PLVGVSSYQKVSICLPMDTQSTVAQVYIVSVLILNILAFLVICACYIKIYCAVHNPHYPS
GSKDTNIAKRMAVLIFTDFLCMAPISFYAMSAVLDRPLITVSNSKILLVLFYPLNSCANP
FLYAIFTKAFRGDVFILLSKVGLCQRRAQLFRGQTVSSKGSSGVCHQGRRGKKRDKNEKG
TGGPEEVPIHLQERSGSGQTYLQPTFQQPSLEESRSLDT
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacgaccgacaccgcttgcaggtgataacatgtgcgctgtttaccctcttc
acgttacctatcaaaaccttgggggactccgactcctgccccactgattgcgaatgctca
gagtggaagacttacactatctcctgctttgacattgatgtcattcccacatttcctgca
agcacagagacaatatggcttctggagacgcgtctgacatcagttccaggagatgtcttc
tccaacctggtcaacatctcaaggatatacatatcagtggacgtgacactggcaggactt
gagaggcattccttctacaatctaaagaaaatcacccacatagagatccggaacgcgaag
agtctgtcatacatcgacccagaagcatttaagaaccttccaaacctgaaatacctgggt
attttcaatactggcctcaccatctttcctaatctcaccaacatccactcagatgatatg
aacttcatacttgaaatagctgatcatccttacatatctgaggtcccagccaattcattc
tgtggtattaccaaccaagtgctgacagtgatgttgtacagtaatggcttcaccgacatc
caacatcatgcttttaacgggaccaaactggatgctgtgtacctccataggaacaagcgt
ctgaccaagatggatgaaaggatgtttgctggcactgttagtgggccaatgcttcttgac
gtgtccctgacgggggtgtcatccctccccacagcaggcctggaatctctcagggaactg
atggcccgcagtgcctggaacctgaagaagctcccgccaatcaaaaccttcaaacacctg
attaccgcagacctcacctacccctcccactgctgcggcttcaagaacctcaagaagaag
agaggatacctggagtacatcatctgcaacctgacagctttctacgaccagcatcaaaag
agatcagtagatcccctcagagtcccatcccttcaagtaggcccagcctctgatgctgca
gcagaccagcaacagaagagatctgtgggtcccctcacagttccatccctccaaggggac
cccatgggggatgcagccgaccagcagcccattgaggggggcttcagagatgaggtgttc
agagacatccagggagacccccggagagacttccacagcagcctccactaccatgcttac
tttgggggccagccggacgatgacgtgggcttcggggagacactgaagaacccccaggag
gacaccagccaggactttgacagtcgctacgactacgtggtctgtgaggaaggcgaggag
gtgacctgtgcccctgcgccggacgagttcaacccgtgcgaggacatcatgggcttcagc
ttcctgcgggtgtctgtgtggtttgtctctctactggctgtagtaggcaacatggtggca
cttctagtcctcctcacctctcactacaagctctccgtctcccgcttcctcatgtgtcac
ctggccttcgctgacctctgcatggggatatatctcctcctcatcgcctctgtggacctt
cacacccgggcagaatactacaaccacgccatcgactggcagacggggccaggctgcggg
ttagcagggttcttcaccgtgtttgccagcgagctgtcggtgtatacgctgacggtgatc
acgctagaaaggtggcatgcgataacgttcgccatgaggctggacaggaagttgcgtctg
ccccatgctgctgctgtgatgctggctggatggttgttctgtctcctcctagcggtgctc
cccctagtgggggttagtagttaccagaaggtcagtatctgcctgcccatggacacccag
tccactgtggcccaggtgtacattgtctcagtcctgatactcaacatcctggcatttctg
gtcatctgtgcctgttacatcaagatctactgcgctgtccacaacccgcactacccgtcc
ggctccaaagacaccaacatcgccaaacgcatggccgtccttatcttcacggacttcttg
tgtatggcacccatctccttctacgccatgtcggcggttctggaccggcctctcatcact
gtatccaactctaagatcctgctggtgctcttctaccctctcaactcctgtgccaacccc
ttcctgtacgccatcttcaccaaggccttcaggggggacgtctttatcctgctcagtaag
gtggggctgtgccagcgccgggcgcagctcttcagagggcagacggtcagttcgaagggt
agcagtggggtatgtcaccagggccggagaggtaagaagagagacaaaaatgagaaggga
acaggaggaccagaggaggtacccatccacctgcaggagcgttctgggtctggtcaaacc
tacctccaacccactttccagcaacccagtctggaggagagccgtagcctggacacgtga
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