KEGG   Coregonus clupeaformis (lake whitefish): 121553219
Entry
121553219         CDS       T08357                                 
Name
(RefSeq) stromal cell-derived factor 1
  KO
K10031  C-X-C motif chemokine 12
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060  Cytokine-cytokine receptor interaction
cclu04672  Intestinal immune network for IgA production
cclu04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121553219
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    121553219
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    121553219
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:cclu04052]
    121553219
   00536 Glycosaminoglycan binding proteins [BR:cclu00536]
    121553219
Cytokines and neuropeptides [BR:cclu04052]
 Cytokines
  Chemokines
   121553219
Glycosaminoglycan binding proteins [BR:cclu00536]
 Heparan sulfate / Heparin
  Chemokines
   121553219
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 121553219
NCBI-ProteinID: XP_041722161
LinkDB
Position
27:complement(51749298..51793191)
AA seq 98 aa
MDLKLLAVMSVLAVATYAPFSQAKPFSMIERCWCRSTVNTVPQRNIRELKFLHTPNCPFQ
VIAKLKNHKEVCINPETKWLQQYLKNALNKMKKAKQTN
NT seq 297 nt   +upstreamnt  +downstreamnt
atggatttgaaactcttggcggttatgtctgtgcttgctgtggcgacatacgctcctttc
tcacaagctaagcccttcagtatgatcgagaggtgctggtgtcgttctacagttaacacc
gtcccccagcgcaacatcagagaactgaagttcctacacacacccaactgccccttccaa
gtgattgccaagctgaagaaccacaaggaggtgtgtatcaaccccgagaccaagtggctg
cagcagtacctgaagaatgccctcaacaagatgaagaaagccaagcagaccaactag

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