Coregonus clupeaformis (lake whitefish): 121553219
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Entry
121553219 CDS
T08357
Name
(RefSeq) stromal cell-derived factor 1
KO
K10031
C-X-C motif chemokine 12
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04672
Intestinal immune network for IgA production
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121553219
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121553219
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121553219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121553219
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121553219
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Chemokines
121553219
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Chemokines
121553219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
121553219
NCBI-ProteinID:
XP_041722161
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All DBs
Position
27:complement(51749298..51793191)
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AA seq
98 aa
AA seq
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MDLKLLAVMSVLAVATYAPFSQAKPFSMIERCWCRSTVNTVPQRNIRELKFLHTPNCPFQ
VIAKLKNHKEVCINPETKWLQQYLKNALNKMKKAKQTN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaactcttggcggttatgtctgtgcttgctgtggcgacatacgctcctttc
tcacaagctaagcccttcagtatgatcgagaggtgctggtgtcgttctacagttaacacc
gtcccccagcgcaacatcagagaactgaagttcctacacacacccaactgccccttccaa
gtgattgccaagctgaagaaccacaaggaggtgtgtatcaaccccgagaccaagtggctg
cagcagtacctgaagaatgccctcaacaagatgaagaaagccaagcagaccaactag
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