Coregonus clupeaformis (lake whitefish): 121553870
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Entry
121553870 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Mdm2-like
KO
K06643
E3 ubiquitin-protein ligase Mdm2 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04068
FoxO signaling pathway
cclu04110
Cell cycle
cclu04115
p53 signaling pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04144
Endocytosis
cclu04218
Cellular senescence
cclu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121553870
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
121553870
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121553870
09143 Cell growth and death
04110 Cell cycle
121553870
04115 p53 signaling pathway
121553870
04218 Cellular senescence
121553870
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
121553870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121553870
04121 Ubiquitin system [BR:
cclu04121
]
121553870
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121553870
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121553870
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
MDM2/MDM4 proteins
121553870
BRITE hierarchy
Motif
Pfam:
zf-C3HC4_3
SWIB
zf-RanBP
zf-RING_2
FAM117
Motif
Other DBs
NCBI-GeneID:
121553870
NCBI-ProteinID:
XP_045077455
LinkDB
All DBs
Position
7:72727694..72752754
Genome browser
AA seq
516 aa
AA seq
DB search
MPTIPEKTKHFLLVQRQIEVKDRMAENCERMSEWHRTGSQINTLDNEKLVRPKEKLHILL
QQAGADKDVFTMKEVIFYLGQYIMKKQLYDMKQQHLVHCADDPLGAVLGVDSFSVKEPRV
LFAMITQNLLAVQNQESQSLFTEPRSQSEPDRGPKETDSDCPSSSSTSERRRRRSDPAGT
SSTQEEDGCEPRKRHRSDSFSLTFDDSMSWCVIGGLRRDRRSTESSDSHSNTEVGSSVSD
VCDDVLSQDLDSDNFSVEFEVESIDSDAYSDPEEASVSGEDEVYEVTIFEAEEEDSFDDD
TEITEADYWKCSKCEELNPPLPRNCNRCWKLRKDWFPESDSNSAITTTTTTTAPNQTFAP
KPSPAPTETDETEAEGLDVPDGKRARSPLPLLKDSQELVSVSGPDSQDSACSSQPSTSSS
SSSGGVGSGSSSSAPFSQEVMAPDLERFNSQEAHLPASCLEPCVICQTRPKNGCIVHGRT
GHLMACYTCAKKLKKRNKLCPVCREPIQSVVLIYLS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaataccagagaagaccaaacactttctgctggttcaacgacaaatagaggtg
aaagacagaatggcagagaattgtgagagaatgtcagaatggcatagaactggttcccaa
ataaatacgttggacaatgagaaacttgtacgaccaaaagagaaactgcacatcttatta
cagcaggcaggtgcagacaaagacgttttcaccatgaaagaggtgatattctacctgggg
cagtacatcatgaagaagcagctttatgacatgaagcagcaacacctagtgcactgtgct
gacgacccactgggggctgtactgggagtggacagcttctctgttaaagagccacgagtc
ctcttcgctatgatcacacaaaatctcctagcagtgcaaaatcaagaatcccagtctctg
ttcacggaacccaggagccagagtgaaccggatagagggcccaaggaaacagactcggac
tgtccttcatcatcatctacctcagaacgcaggaggaggaggagtgaccctgcgggcaca
tcatcgacacaagaggaggacggctgtgagcccaggaagaggcataggtcagatagcttt
tctctaacctttgatgacagcatgtcctggtgtgtgataggaggcctgagacgagaccgg
aggagcactgagtcttcagactcccacagtaacactgaagtaggttcatcggtcagtgac
gtgtgtgacgatgttctgagccaggatctggactctgataacttcagcgtggagtttgag
gtggagtccattgactcggatgcctacagcgatcccgaagaggcttcagtgtctggagag
gacgaggtgtatgaagtcaccatctttgaagcagaggaggaggactcgttcgatgacgac
actgaaatcacggaagcagactactggaagtgctcgaagtgtgaggagttgaaccctccc
ctcccccgtaactgcaaccgctgctggaagctaagaaaggattggtttcccgagtctgac
agcaactctgctatcaccaccaccaccaccaccacggcccccaaccaaacctttgccccc
aagccttccccagccccgacagagacagacgagaccgaggctgaaggactggatgtccca
gacgggaagagagcccggtcgccccttcccctcctcaaagactcccaggaattggtgtcc
gtctctggccccgattcccaagactcggcctgctcctcccagccctccacctcttcttct
tcttcttccggtggtgtaggctcaggctcatcctctagcgcccccttcagccaggaagtg
atggcaccggacctggagcgcttcaacagccaggaggctcacctccccgccagctgcctg
gagccctgcgtcatctgtcagaccaggcccaagaacggctgcatcgtacacggacgcacc
ggacacctcatggcctgttacacctgcgccaagaaactgaagaagaggaacaagctgtgt
ccagtctgcagggagcccattcagtccgtcgtcttaatctatctcagctga
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