Coregonus clupeaformis (lake whitefish): 121554494
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Entry
121554494 CDS
T08357
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121554494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121554494
04121 Ubiquitin system [BR:
cclu04121
]
121554494
Membrane trafficking [BR:
cclu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121554494
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121554494
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_SCAP
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
DSE1_N
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
F-box-like
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_DCAF12
ASA1
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_NOL10_N
F-box
TRM82_WD
Beta-prop_RIG_1st
PQQ_2
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
121554494
NCBI-ProteinID:
XP_041724031
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MKQDPLTKGSNTVTPRPGRRDSIGATTLASTPSSTSSISSSSSSREERRKVEEEEYICRE
EEEGEMVSVSIVTIAEESCPSEPFGTVGGHVEVAANESAVRDGDGQSKTSQSTQTEEEEG
EEEGRNQVFVSDSLTPGTPSALLNIKIKRKLDHGPDVRPFPSGKKHCKGSDYHSPSSLVP
FQTTPTTFGDLRAANGHSAQRRRVTSGPPPSGLQDWLHTFQAWSGPERLLALDDLIDSCE
SNQVKHMMQVIEPQFQRDFISLLPKELALYVLTFLEPRDLMHAAQTCSYWRILAEDNLLW
REKCREQGIEEPLVVKRRETLKPGFLHSPWKSAYVQQHHIESNWRTGDITSPKVLKGHDD
HVITCLQFCGDLIVSGSDDNTLKVWSALTSKCLRTLVGHTGGVWSSQMSGNMVISGSTDR
TLKVWDAESGECVYTLYGHTSTVRCIHLHDKQVVSGSRDATLRLWDVESGECLHVLTGHV
AAVRCVQYDGRRVVSGGYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGVYVVSGSLDT
SIRVWDIETGGCVHTLTGHQSLTSGMELKNNILVSGNADSTVRVWDIRTGQCLHTLQGPH
KHQSAVTCLQFSRSLVVSSSDDGTVKLWSLATGEWLRDLVALQSGGSGGVVWRIRVSNTR
LVAAVGSRNGTEETKLMVLDFDLTDNHK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggatccgttgaccaaggggagtaacaccgttacacctcgtccaggaaggaga
gactctataggggcaacgacgctagccagcaccccttcctccacctcctccatctcttcc
tcatcctcttcgcgagaagaaaggagaaaggtggaggaggaggagtatatttgtcgagag
gaggaagagggggagatggtcagcgtttccatagtgaccatagcggaggagtcctgccct
tcggaaccgtttggaactgtgggcggtcacgtggaggtagcagccaatgagagcgcagtg
agggatggagacggccaatcaaaaacttcccagagcacccagactgaagaagaggagggt
gaggaagagggaaggaaccaggtgtttgtctcggacagcctgacccccggaacaccttca
gcactcctcaacatcaagataaagaggaagttggaccatggaccagacgtcaggccgttc
ccttcaggcaagaaacactgcaaaggatccgactaccacagtccgtccagtctcgttcca
ttccagaccacgcccactacctttggggacctgcgagcagccaatgggcattcagctcag
cggagacgtgtcacctcaggcccgcccccctccggcctacaggactggctgcacaccttc
caggcgtggagtggtcctgagcgtctattggctctggatgacttgattgacagctgtgag
tccaatcaggtgaagcacatgatgcaggttattgagcctcagttccaacgagacttcatc
tccctgctgcccaaagagttggccttgtatgtcctgacgtttctggagcccagagatctg
atgcatgctgcccagacctgctcctactggaggatactggccgaggataacctgctgtgg
agggagaagtgtagggagcagggtatagaagaacccctggttgtgaagaggagggagact
ctgaaacctgggtttctccactcaccctggaagagtgcctacgtacaacaacaccacata
gagagcaactggaggactggagatatcacctcacctaaggtgctgaagggtcatgatgat
catgtgatcacttgtctgcagttctgtggtgacctcatagtcagtggatctgatgacaac
actctgaaagtctggtctgccctgaccagcaagtgtctgcgtacgttagttggccataca
ggaggggtgtggtccagtcagatgagtggtaacatggtgatcagcgggtcgacagacagg
actctgaaggtttgggacgcggagagtggagagtgtgtttacaccctgtacggacacacc
tctaccgtacgctgcatacacctgcatgacaaacaggtggtgagcggtagccgtgatgct
acgttgcgtctgtgggacgtagagtctggcgagtgtctccacgtcctaacgggtcatgtg
gcggcggtgcggtgtgtccagtacgacgggcgcagggtggtcagcggtggatacgacttc
atggtcaaagtctgggaccctgagacagagacctgtctacacacactacagggacacacc
aacagagtctattcactacagtttgacggtgtctacgtggtcagtggatctctggacacc
tccatcagagtatgggacatcgagacgggggggtgtgtccacacgctgaccggccaccaa
tcactgaccagtggtatggaactaaagaataacatcctggtctctggcaacgcggactct
actgtcagggtgtgggatatacggactggacagtgtctccacacactacaaggtccccat
aagcaccagtcggcagtaacctgtctccagttctctcgctccctggtggtctcgtcatca
gatgacggtacagtgaagctgtggagcctggcgacgggggagtggctcagagacctggtg
gctctgcagagtggaggatccgggggagtggtctggaggatcagggtgtctaacactaga
ctggtagcagccgttggcagcaggaacgggacagaggagactaaactcatggtgctggac
tttgacctcactgacaaccacaagtga
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integrated database retrieval system
