Coregonus clupeaformis (lake whitefish): 121555093
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Entry
121555093 CDS
T08357
Symbol
gdf3
Name
(RefSeq) protein DVR-1
KO
K22672
growth differentiation factor 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121555093 (gdf3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cclu04052
]
121555093 (gdf3)
Cytokines and neuropeptides [BR:
cclu04052
]
Cytokines
Transforming growth factors (RSTK binding)
121555093 (gdf3)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
ARMET_C
Motif
Other DBs
NCBI-GeneID:
121555093
NCBI-ProteinID:
XP_041724831
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All DBs
Position
40:10929744..10932274
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AA seq
379 aa
AA seq
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METLVILAFAILSISASALGNGEDLKTQERLFLNSLGLSARPKPSAHRRVPSVLWRMFKS
TSTRDNDTHESDPCMVSEYGVRGNIVRFVQDQGRLVSGWSGSCHGCVEKHLFFNMSVLQP
VEQLSLAQLEIKFQWDMFRTPRFVLGPQALSVSLYKVLRATLRGASHEANRRLVLSQSVQ
LEPEPGSLTLDLTALAENWRKPGHNFGLVLELQPHPAHTLTTDIFMAQNLANAVPFGPTV
SLPDFHASLVAVSLNPLQCRSRQKRSAVYLPVTPSNVCKPRRLYIDFKDVGWQDWIIAPQ
GYLANYCHGECPFPLSESLNGTNHAILQTLVHSLDPRGTPQPCCVPIRLSPVSMLYYDNN
DNVVLRHYQDMVVDECGCR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagactttggttattttagcctttgctattttatccattagtgcgtctgctttagga
aatggagaagatttgaagactcaggagcgcttgtttttaaattcgttgggcctctccgct
cggccgaagccgtcagcacaccgccgcgttccctccgtgttgtggaggatgttcaaaagt
accagcacccgggacaacgacacccacgaaagcgacccgtgcatggtatccgagtatgga
gttcgcgggaacattgttcgatttgtgcaggaccaaggtagactggtgtcaggctggagc
ggcagctgccacggctgtgtggagaaacatctgttcttcaacatgtccgtcctgcagcct
gtggagcagctctctctggcgcagctggaaatcaagttccagtgggacatgttccgcaca
ccaaggttcgtcctgggcccacaggcgctcagcgtatccctgtacaaggtgctgcgtgcg
accctgaggggagcgagccacgaggccaaccgcaggctggtgctgtcccagtcggtgcag
ctggagccagagcccggatccctcaccctggacctcacggcgctggcagagaactggcgt
aaaccgggtcataacttcggcctggtgctggagctgcagccacaccctgcccacaccctg
accacggacatcttcatggcccagaacctggcgaacgccgtcccgtttgggccgaccgta
tccctcccagatttccatgcctcactggtggctgtatccctgaacccgctccagtgccgc
tctcggcagaagaggagcgccgtctacctcccagtgactcccagcaacgtgtgtaagccc
cgccgtctctacatcgacttcaaggatgtgggctggcaggactggatcatcgctccgcag
ggctacctggccaactactgccacggagagtgcccgttcccactgagcgagagcctgaac
ggcaccaaccacgccatcctgcagacactggtgcactccctggacccccgcggcacaccc
cagccctgctgcgtacccatccgcctgtcacctgtctcaatgctctactacgacaacaac
gacaacgtagtcctacgtcactaccaggacatggtggtggatgagtgtggctgcagatga
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