Coregonus clupeaformis (lake whitefish): 121558043
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Entry
121558043 CDS
T08357
Name
(RefSeq) fibrinogen beta chain isoform X1
KO
K03904
fibrinogen beta chain
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
cclu04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121558043
04518 Integrin signaling
121558043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121558043
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121558043
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
121558043
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121558043
Hyaluronan
Extracellular matrix or blood plasma proteins
121558043
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
ORC-CDC6-like
DUF6079_5th
Kazrin
Motif
Other DBs
NCBI-GeneID:
121558043
NCBI-ProteinID:
XP_041727457
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MKWLLLLCLCVYAVRCQDDYDEYDLGVKTEPKTVVDPRGHRPLSRGSETYSPARNSPPPV
SGGSQYRGRPTAAPARGMEQEKDEQPEAGGCTHASEQMGVLCPTGCELKTAMLKQERNVK
EEVRKMQKDVDDLSRSTNNVYNYVDGMSTALRERQLVSNENGDLVSQYTDDLETQHAFAK
EAIDTVFPSNIRILQGVLEKIRLKIQRVEKAILAQREECKEPCTVSCPIPVVSGKECEDI
FRKGGRDSGMYLVQPDSFYPPYKVYCDQTTQNGGWTTIQNRKDGSVDFSRRWDNYRSGFG
NIAFDVGKGHCNTPGEYWLGNDRISQLTKQGPTEVLMEMEDWSGNKVHAQYKQFTIQGET
SNYVMAINGYSGTAGNVMLEGATGLYGENRTMTIHNGMMFSTYDRDNDNWTPGDPSKQCS
REDGGGWWYNRCHSANPNGRYYWGGAYTRYMAKHGTDDGMVWMNWKGSWYSLKAICMKIR
PYFASR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggctactgctgctctgcctgtgtgtctacgctgtccgttgtcaagacgactac
gacgaatatgacctgggggttaagaccgaacccaaaacagtagtggaccctcgcggccac
cgtcccttatccagagggagtgagacctacagccccgcccgcaacagccccccacccgtc
agcggcggcagccagtaccgtggtcgaccaacggcggctcccgccagaggcatggagcag
gagaaggatgagcaaccggaggctggagggtgtacacatgcctcagaacagatgggggtg
ctgtgtcctacgggctgtgagctgaagacagccatgctgaaacaagagaggaacgtgaaa
gaggaagtgaggaaaatgcagaaagatgttgacgacctgtcgagatccactaacaacgtc
tataactacgtagacggcatgtccacagcgctgagagagagacagctagtcagcaacgag
aatggtgacctggtgagtcagtacacggacgatctggagacccagcatgcctttgcaaag
gaggctatagacaccgtcttcccctctaacattaggattcttcaaggggtccttgagaag
atcaggttgaagattcagagagtggagaaggctatcctggcccagagggaggaatgcaag
gagccatgcaccgtctcctgccccatacctgttgtctctggtaaggagtgtgaggacatc
ttcaggaaaggaggaagggattctgggatgtatctggtccagcctgactccttctacccg
ccctacaaggtctactgtgaccagaccacgcagaacggaggctggaccactattcagaac
aggaaggatggttctgtagacttcagccgacgttgggacaactaccgcagcggtttcggg
aatatcgccttcgacgtcgggaagggacactgcaacactccaggggagtactggctgggt
aatgaccgcatcagtcagctgaccaagcagggtcccactgaggtcctcatggagatggag
gattggtccggaaacaaggtccacgcccagtacaaacagtttaccatacagggcgagacg
tcaaactacgtaatggcgatcaatgggtactcgggcacggccggtaacgtgatgctggag
ggagctacggggctgtatggagagaaccggaccatgaccatccacaatggaatgatgttc
agcacctacgacagggacaacgataactggactccaggtgacccgtccaagcagtgctcc
cgtgaagacggcggtggctggtggtacaacaggtgtcactcagccaatcccaacggccgt
tactactggggcggggcttacacacggtacatggcaaaacacgggacagatgacgggatg
gtgtggatgaactggaagggatcctggtactctctcaaagccatctgcatgaagatcagg
ccctacttcgcctcgcggtag
DBGET
integrated database retrieval system