Coregonus clupeaformis (lake whitefish): 121560263
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Entry
121560263 CDS
T08357
Name
(RefSeq) interleukin-1 receptor accessory protein
KO
K04723
interleukin 1 receptor accessory protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121560263
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121560263
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121560263
Cytokine receptors [BR:
cclu04050
]
Interleukin receptor families
IL1 receptor family
121560263
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Gene cluster
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Motif
Pfam:
TIR
Ig_3
ig
Ig_2
TIR_2
I-set
Ig_6
PKD_3
Motif
Other DBs
NCBI-GeneID:
121560263
NCBI-ProteinID:
XP_045061124
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Position
19:6247..18278
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AA seq
639 aa
AA seq
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SQCHDWGESDNGAVWVMEGEAGWLSCPLFSHPTVYNYNSTQAAGLNLVWYHVAAGQDLEQ
PIDFHHLDQRLSKEREKLWLQPTTMQDTGQYICMLRNRTSCAKIAVRLVVVPRGQNPNCE
VKSAVPPTLVIAPIQEGKTLTCPDLEDIKRPNSSHSVTWYHDCKAFRNFDRVLKEDKLVI
YIMFEHYQGLYHCVVTYETKGRVINFTRVVNVTAVSSSGLPKEPNILNPAKEQLYPVKQG
SEVNLICKVSLPYLEGPRETWWTINGKTVEQLADPRISFTSRVVLVYYGDWTVENVLHIQ
DFSSEDLTREYNCSGRNNRGMATRRAVLEEEVYLPSVELGCGLGVTLFLMLVLFLVYNIF
WLELLLFYRSWFGTDERCTDDKEYDIYISYARNSDEEQFVLLTLRRVLENELGYTVCIFD
RDSLPGGNVSEAVLRCMQSSCRILLVLSPDYLTEKSVSLLECRLGLYIQLTSHAHIITIL
YGPLPRLLASCTEAQQLRRSTDTITWRGRQSEPPTSRFWKRLRLALPVRPLALGRRLIDS
TSSHSDLAASLFLQRQQQDAVEPQRDGKGDAGIGGRGRGRKWRIQRIQGARSRGEMSKVK
EVGHGKNCSVCVSFREPRGVLGRASAKTQLHHQPVVNSN
NT seq
1922 nt
NT seq
+upstream
nt +downstream
nt
agtcccagtgccacgactggggcgagtcagacaatggagccgtgtgggtgatggaggggg
aggcaggctggctgtcctgccctctcttctcccaccccactgtctacaactacaactcga
cccaggcagcgggcctcaacctggtgtggtaccacgtggctgcaggtcaggacctggaac
agcccatcgacttccaccacctcgaccagaggctcagcaaggagagggagaagctgtggc
tgcagccaaccaccatgcaggacacgggccagtacatctgcatgctgagaaacaggacat
cgtgtgccaagattgccgtgcgcctggtggtggtgccacgtggccagaaccctaactgtg
aggtgaagtctgctgtgcctcccaccttagtcatcgcgccaatacaggagggcaagaccc
taacctgccctgacctggaggacatcaagcgacctaactctagccactctgtcacctggt
accatgattgtaaggccttcaggaactttgatcgtgtgctcaaagaagacaagctggtca
tctatataatgttcgagcactaccaaggactgtaccactgtgtggtcacttatgagacca
aaggaagagtcatcaacttcactagagtggtcaatgtaactgcagtgtcttccagtggtt
tacccaaagagcccaatatactcaaccctgccaaggagcaactctatcctgtcaaacaag
ggtcagaggtgaatctcatatgcaaagtgtcgttgccctacctggaaggacccagggaga
cctggtggaccatcaatgggaagactgtagagcagctagctgacccccgcatctcattca
cttctagggtggtgttggtttattatggggactggacagttgagaatgtgctccacatcc
aggacttcagctcagaggacctgaccagagaatacaactgctctggacgcaataaccgag
gcatggccacccgcagggcagtgctagaagaggaggtgtacctgccatccgtggagctgg
gctgtggcctgggcgtgactctgttcctgatgctggtgctgttcctggtctataacatct
tctggctggagctgctgctgttctatcgctcctggttcggaactgacgaacgctgtacag
acgacaaggagtatgacatctacatctcgtatgcaaggaatagcgacgaggagcaatttg
tcctcttgacactgcgcagggtcctggagaacgagctgggatatactgtctgcatcttcg
acagggacagccttcctggagggaatgtgtcggaggctgtcctcaggtgtatgcagtcaa
gctgccggatcctgctggtccttagccctgactatctgacagagaagagcgtcagcctgc
tggagtgtcgcctgggcctctacatccagctcaccagccatgcacacatcatcaccatcc
tttacggccccctcccgagactattggcctcctgcactgaggcccagcagctacgccgca
gtaccgacaccatcacctggaggggacgccagtcggagccgcccacctctcgcttctgga
agcgcctgcgcctggccctgcctgtgaggccgctggccctggggaggaggctcatcgaca
gtacctcgtcccactccgacctggccgcttcattgttccttcagcgccagcagcaggatg
ctgtggagccgcagagggatgggaagggggatgcaggcatcggtggcagaggcagggggc
gcaagtggaggatacagaggatacagggggcgcgcagcagaggagagatgtcgaaggtta
aagaggttggccacggtaagaactgtagtgtgtgtgtgagttttagggagcctcgcgggg
tcttgggtagggcgtcggcgaagactcagcttcatcatcaacccgtagtaaacagtaact
ga
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