Coregonus clupeaformis (lake whitefish): 121560275
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Entry
121560275 CDS
T08357
Symbol
fbxw7
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121560275 (fbxw7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121560275 (fbxw7)
04121 Ubiquitin system [BR:
cclu04121
]
121560275 (fbxw7)
Membrane trafficking [BR:
cclu04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
121560275 (fbxw7)
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121560275 (fbxw7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
Beta-prop_SCAP
WDR55
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
F-box-like
ANAPC4_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
ASA1
Beta-prop_RIG_2nd
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_RIG_1st
Beta-prop_ACSF4
TRM82_WD
F-box
CFAP251_N
PAC11
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
PQQ_2
WD40_RFWD3
Ge1_WD40
Beta-prop_IFT140_2nd
Beta-prop_NWD2_C
Beta-prop_LRRK2
Beta-prop_IFT140_1st
KNTC1_N
eIF2A
CDtoxinA
PALB2_WD40
Beta-prop_pof12
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
121560275
NCBI-ProteinID:
XP_045064424
LinkDB
All DBs
Position
3:39952588..40066465
Genome browser
AA seq
630 aa
AA seq
DB search
MLRHCPIPLFASSGARKKMPKASGKEKAPLATPESQALDIVADPKVVVKVAKEPPLPPQK
VLRIFSINIITQGLPFCRRRVSAAGLGPKMKRKLDHGPEVRSFPSGKKPCKGSEYPSATG
LVPYPATPTTFGHIRTANGQGQQRRRITSIAPPTGLEEWLRTFQSWSGPEKLLALDELID
RCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDN
LLWREKCREEAGIDEPLSFKKRKITKPGFSRSPWKCAYIRQHRIDTNWRRGDLRSPKVLK
GHDDHVITCLQFCGNRIVSGSDDNSLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISG
STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL
MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSG
SLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTL
QGPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRA
SNTKLVCAVGSRNGTEETKLLVLDFDVDMK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggcattgccccataccccttttcgcatcttccggagcccgaaagaagatgccc
aaggcctctgggaaagagaaggcccccctggcaacaccggagagccaggccctggacata
gtggcagacccaaaggtggtggtcaaggtggctaaggagcctccactgcccccgcagaaa
gtgctccggatcttcagcatcaacatcatcactcaggggctgcccttctgtcgcagacgg
gtgagtgctgccgggcttgggcccaagatgaagagaaagttggaccatggcccagaggtc
cgatctttcccttcaggaaaaaagccctgcaaaggctccgagtatccaagtgctacaggg
ctggtcccctacccagccacccccaccacgtttgggcacatcaggacagctaacggtcag
gggcagcagaggcggcgcatcacctccatcgctcctcccacaggtctcgaggaatggctc
cggacgtttcagagctggagtggcccagagaagctgctggcgctggatgagttgatcgac
cgctgtgagcccacgcaggtcaaacacatgatgcaggtcattgagccgcagttccaacgc
gactttatctccctgctgcccaaagagttggccctgtacgtgctgtcgttccttgagccc
aaggacctgctgcaggccgctcagacgtgtcgttactggaggatcctggctgaagacaac
ctcctctggagggagaagtgccgggaggaggcaggcattgatgagcctctatccttcaag
aagaggaaaatcaccaagccaggcttcagccgcagcccctggaaatgtgcctacatcagg
cagcataggatagataccaactggaggagaggagacctccgatcacccaaggtgcttaag
ggtcatgacgaccatgtcatcacctgcctccagttctgcggtaatcgcatcgtcagcggc
tctgatgacaactcgctcaaggtctggtcggctgtcacaggaaagtgtctgaggacgttg
gtgggccacacggggggcgtgtggtcgtcccagatgagggacaacatcatcatcagcggc
tccaccgaccggacgctcaaggtctggaacgcagagacgggagaatgtatccacaccctg
tacgggcatacctcaacggtgcgctgtatgcacctgcacgagaaaagggtggtgagtggt
tctcgtgacgccacgctgcgtgtgtgggacatcgagacgggccagtgtttacacgtcctc
atgggccacgtggcggcggttcgctgcgtccagtacgacggccgcagggtggtcagcggg
gcctacgacttcatggtcaaggtctgggaccccgagactgagacctgcctccacacgctg
cagggccacaccaacagagtctactcactacagtttgatgggatccacgtggtgagtggt
agcctggacacgtctatccgggtgtgggatgtggagacgggtaactgcatccacactctg
acaggtcatcagtccctcaccagtggcatggagctcaaagacaacatcctggtctcgggc
aatgccgactccaccgtcaagatctgggacatcaagacgggacagtgcctgcagacgttg
caaggtccccacaagcaccagagcgccgtgacgtgcctgcagttcaacaagaactttgtc
atcaccagctcggacgacggcacggtgaagctgtgggacctgaagacgggcgagttcatt
cgtaacctggtgaccctggagagcggcggcagcggtggggtggtgtggcgtatccgggcc
tccaacaccaagctggtgtgtgccgtgggaagccgcaacggcaccgaagagacaaaacta
ctggtgctagactttgacgtggacatgaagtga
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