Coregonus clupeaformis (lake whitefish): 121562124
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Entry
121562124 CDS
T08357
Name
(RefSeq) fukutin-related protein-like
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00515
Mannose type O-glycan biosynthesis
cclu01100
Metabolic pathways
Module
cclu_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
121562124
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121562124
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121562124
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121562124
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121562124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
TauE
Motif
Other DBs
NCBI-GeneID:
121562124
NCBI-ProteinID:
XP_041730429
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Position
5:complement(11857800..11861981)
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AA seq
535 aa
AA seq
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MRVSFCQGLLTGAIALNLLILYYVSRAQQQMMEKRRDPGRGSRKAALPASGLGGGMGGLV
GVGGGMVGAGGVRGEGNSRGPRVTVLLREFEDFENYVGDVARSFLHQRPELPFLAVSDTP
PYPPLSLPEGARLLVLSPSPEQPPQAHRPEFHVQTEFVLLVPDGVELEQGRAVERLIREL
EGEGGGPVRLVAAPVLARSAVQCLHLRVSLREWTATYTPAASGSSGSVCTALQGDAVVLI
RSEDLFNLSVPLGRPLLPSLFIQTSLHGWKVKLLESPCFSASHRPLFSSAHNQWKADGHL
KEATSRLMRNFGLKRLLLADGKEQWHGCGKETARCFGTVRDDTPEYLYLERWTPPCCLRA
LRETTKYVINILESSGVRYWLEGGSLLGAARHQDIIPWDYDVDLGIYLEDVPNCDYLKNL
DSGSLVDANGYVWERAVEGDFYRVQYSEANHLHVDLWPFYPRNGVMTKDTWMEHKQDVEF
PEHFLQPLVPMPFAGVTAYGPNNYRAFLELKFGEGVIENPQYPNPAKKRLDRSRL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgagtttctgccagggccttctgactggagccatcgctctgaacctgctcatc
ctctactatgtgtcccgagcccagcagcagatgatggagaaacgccgggatccaggaagg
ggctccaggaaggctgctttacctgcatccgggctggggggtggcatggggggcctggtg
ggggttggcggggggatggttggcgctggaggtgtcaggggagaggggaacagccgcggc
ccccgtgtgactgtcctcctacgggagtttgaggactttgagaactacgtcggtgatgtg
gcacgctccttcctgcaccagagacctgagctgcccttcctggctgtgtctgacacccca
ccctatccccctctgtctctccccgagggggcccgtctcctggtgctctcccccagcccc
gagcagcctccgcaggcccaccggccagagttccacgtccagacagagtttgtgctgctg
gtgcctgacggggtggagctggagcagggccgggctgtggagaggctgatccgggagctg
gagggggagggtggggggcccgtgaggctggtggcagcccctgtgttggcacgctcggcc
gtccagtgcctgcacctgcgggtcagtctgagagagtggacggccacctacaccccagcg
gcgtctgggagcagtggtagcgtgtgtacagcccttcagggggatgcggtggtcctcatc
cgctccgaggacctcttcaacctgtctgttccgctggggaggcccctgctgccctcgctc
ttcatccagacctccctgcatggctggaaggtcaagctcctggagagcccctgcttctcc
gccagccaccggcccctcttcagctcagcccacaaccagtggaaggcagatggccatctg
aaggaggccactagccggctgatgaggaactttggactaaagcgtctcctactggctgat
gggaaggagcagtggcacggctgtgggaaggagacggcgcgttgcttcggtacggtccga
gacgacacccctgagtacctgtacctggagcgctggacccctccctgctgcctgcgtgcc
ctccgcgagaccaccaagtatgtgatcaacattctggagagttccggggtgcgctactgg
ctggaaggaggctccctgctgggtgcggcccgccaccaggacatcatcccctgggactat
gatgtggacctgggcatctacctggaggacgtgcccaactgtgactacctgaagaacctg
gactctggttctctggtggacgctaacggctatgtgtgggagcgggcagtggaaggtgac
ttctatagggtgcaatacagtgaagctaaccacctccacgtggacctgtggcccttctac
ccacgaaacggcgttatgaccaaagacacgtggatggagcacaagcaggatgtggagttc
cccgagcacttcctgcagccgctggtgccaatgccattcgccggcgtcaccgcctacggc
ccgaacaactaccgcgccttcctggagctcaagtttggggagggggtcatcgagaacccc
caatacccaaaccctgccaagaagaggctggacaggagccggctttga
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