Coregonus clupeaformis (lake whitefish): 121567391
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Entry
121567391 CDS
T08357
Name
(RefSeq) fukutin-related protein-like
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00515
Mannose type O-glycan biosynthesis
cclu01100
Metabolic pathways
Module
cclu_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
121567391
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121567391
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121567391
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121567391
Membrane trafficking [BR:
cclu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121567391
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
TauE
Motif
Other DBs
NCBI-GeneID:
121567391
NCBI-ProteinID:
XP_041733340
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Position
6:complement(42424012..42428848)
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AA seq
535 aa
AA seq
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MRVSFCQGLLTGAIALNLLILYYVSRAQQQMMEKRRNPGRGSRKAALPASGLGGGIGGLV
GVGVGIIGAGGVGGEGNSRGPRVTVLLREFENFENYVGDVARSFLHQRPELPFLAVSDTP
PYPPLSLPEGARLLVLSPSPEQPPQAHRPEFHVQTEFVLLVPDGVELEQGRAVERLIREL
EGEGGGPVRLVAAPVLARSAVQCLHLRVSLREWTATYNPAASGSSGSVCTALQGDAVVLI
RSEDLFNLSVPLGRPLLPSLFIQTSLHGWKVKLLESPCFSASHQPLFSSAHNQWKADSHL
KEATSRLMRNFGLKRLLLADGKEQWYGCGKETARCFGSVRDDTPEYLYLERWTPPCCLRA
LRETTKYVINILESSGVRYWLEGGSLLGAARHQDIIPWDYDVDLGIYLEDVPNCDYLKNL
DSGSLVDSNGYVWERAVEGDFYRVQYSEANHLHVDLWPFYLRNGVMTKDTWMEHKQDVEF
PEHFLQPLVPMPFAGVTAYGPNNHRAFLELKFGEGVIENPQYPNPAKKRLDRSRL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgagtttctgccagggccttctgactggagccatcgctctgaacctgctcatc
ctctactatgtgtcccgagcccagcagcagatgatggagaaacgccggaacccaggaagg
ggctccaggaaggctgccttacctgcttccgggctggggggcggcatagggggcctggtg
ggggttggcgtggggataattggcgctggaggtgtcgggggagaggggaacagccgcggc
ccccgtgtgacggtcctcttaagggagtttgagaactttgagaactacgttggtgatgtg
gcacgctccttcctgcaccagagacctgagctgcccttcctggctgtgtctgacaccccg
ccctacccccctctgtctctccccgagggggcccgtctcttggtgctctcccccagcccc
gagcagcctccgcaggcccaccggccagagttccacgtccagacagagtttgtgctgctg
gtgcctgacggggtggagctggagcagggccgggctgtggagaggctgatccgggagctg
gagggggagggtggggggcccgtgagactggtggcagcccctgtgttggcacgctcggcc
gtccagtgcctgcacctgcgggtcagtctgagagagtggacggccacctacaacccagcg
gcgtctgggagcagtggtagcgtgtgtacagcccttcagggggacgcggtggtcctcatc
cgctccgaggacctcttcaacctgtctgtcccactggggaggccactgctgccctcactc
ttcatccagacctccctgcatggctggaaggtcaagctcctggagagcccctgcttctcc
gccagccaccagcctctcttcagctcagcccacaaccagtggaaggcagacagccatctg
aaggaggccactagccggctgatgaggaactttgggctgaagcgtctcctactggctgat
gggaaggagcagtggtacggttgtgggaaggagacggcgcgttgcttcggatcggtccgg
gacgacacccctgagtacctgtacctggagcgctggacccctccctgctgcctgcgtgcc
ctccgcgagaccaccaagtatgtgatcaatatcctggagagctccggggtgcgctactgg
ctggaaggaggctccctgctgggtgcggcccgccaccaggacatcatcccctgggactat
gatgtagacctgggcatctacctggaggacgtgcctaactgtgactacctgaagaacctg
gactctggttctctggtggactctaacggctatgtgtgggagcgggcagtggagggggac
ttctatagggtgcaatacagcgaggctaaccacctccacgtggacctgtggcccttctac
ctgcggaacggtgtcatgaccaaagacacgtggatggagcacaaacaggatgtggagttc
ccagagcacttcctgcagccgctggtgccaatgccgttcgccggcgtcaccgcctacggc
ccgaacaaccaccgcgccttcctggagctcaagtttggggagggggtcatcgagaacccc
cagtaccccaaccctgccaagaagaggctggacaggagccggctgtga
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