Coregonus clupeaformis (lake whitefish): 121568009
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Entry
121568009 CDS
T08357
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121568009
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121568009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121568009
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
121568009
Membrane trafficking [BR:
cclu04131
]
SNARE
SNARE associated proteins
Others
121568009
Domain-containing proteins not elsewhere classified [BR:
cclu04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
121568009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
121568009
NCBI-ProteinID:
XP_041734425
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All DBs
Position
1:37358242..37370221
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AA seq
1066 aa
AA seq
DB search
MLATQTPETGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGNANLLCCALEAVF
IHGIKSKYVRSEAGGHARKGGSRGPLPQPVFWSLLKTVTHRDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQADVLDLPCLTKRKESWDTVSQSSGGSDTVEVQRGG
PGVLGKGIGGVSEGRTPLNSSNLSLDTTGSSQLSSSLSSDSLLHGHDPKSPDKEPWPCDL
ENPSNMENNGNAKRHLKDVLVDFRESAHSSQDSMREDSYVSTPGADHLSENTAFSGSDSE
TQGHVTLLTGPSSPASLGSDQEEPSTKTHVPSDVFLHTEGPSSLSDCVERTSTTPHLPVT
ETPREKKTEDSAKSTSEPSAHMNLRHTTSVLSRRVSTDSIAHSHSWISEDDIYKPHLEEL
ADPDDFLLGSGPACVNGLTSPPPEPEIPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGT
VGMWRDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDARVTSAEGRFDLAFPGKRLLMR
AANRDEAEDWVDRIAEAVNKCRPLHRLDDQWEVLQPTDSSVTPDEPPKSSPSSPSSVPAS
PERGGAVVEQELPLELDWTRPTDPESDAIKETVLYFSQDSEARNWTPLVFSLSLETLKGF
RMQDGQKVLCCTHPIEGIRDVVPDVSLGGPAFFRVVTAKDTLKLRAKSSEEARAWRGLIR
GALDSYLESGEDWEPESPGVAPGAGGNIHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQAF
KCAGCPKAIGVSRGKARLCEFSGQYYCDTCHQGDAIVIPSRMVHNWDLAPREVSRQAVKL
LAQIEHEPLLNLDLLNPDLWEHAEAMAQAQSLRQRLRLLGDYLLTCRSGACKNIQSRLGP
RTYLLESSHLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHASDI
IFPFQFDTTTRCKECKAVFHATCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagaccccagagacagggccagaggcaaaagatgtcaagcagtggatc
aaagagaagttggcgtggtcactcaaggctctgcagaagcgttacgtgacaaccgatgtc
gttgttaccagcgaggatggtaacgccaacctgctgtgctgtgcactggaggccgttttt
atccatggcatcaagagcaaatatgttcgctccgaggccgggggacacgccagaaaaggg
gggtcccggggacccctcccccaacctgtgttctggagcctgctcaagacggtcactcac
cgtgacgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgttgc
cgggcctggctgcggctggccctcaaccacggcctgatggagtgctacctggcctccctg
ttccgcgagggctccaaactgcaggcccactaccagccctccgccctgctcctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcttggcctccctcaccttcaacctc
tcgtacaagtcggccgtgctcaacgagtggaccaccacccctctggctctggccggcctc
tgccctgccgcccaggccgacgtgctcgacctcccctgtctcaccaagcgcaaggaatcc
tgggatacggtgtcacagtcgtccggcgggtcggatacggttgaagtgcagcgtggggga
ccaggggtgctggggaaggggattgggggggtctcagagggtaggacccctctaaattct
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcatggtcacgaccccaagagcccagacaaggagccctggccatgtgacctg
gaaaacccctccaacatggagaacaatggcaatgccaagaggcatctcaaagatgttctg
gtagacttcagggagagtgcccactccagtcaggactccatgcgcgaggattcgtacgtg
tccaccccgggcgcagaccacctctctgagaacacggccttcagtggctccgacagcgag
acccagggacatgtcacacttctcactggcccctctagccctgcttcactggggtcagac
caggaagagccgtccactaagacccacgtcccctccgacgtgttcttgcacactgaaggg
ccctccagtctcagtgactgtgtggagagaacatcgacaactcctcacctgcctgtcact
gagacgccacgggagaaaaagacagaagattctgctaagagcacctctgagccttcagcc
cacatgaacctacgccacactaccagcgtgcttagcaggagggtgtctacagactcaatc
gcacattcccactcctggatctctgaggatgacatctataagccacaccttgaggaactg
gctgaccccgatgactttttgcttgggtctggcccagcttgtgtgaacggattgacctct
ccccccccagagcccgagatcccccagtctccccccagcgtggttcaccgcaggcagata
ggcctgtccaaccctttccgcggactgctgaagctgggccacctggagcggcggggcacg
gtgggtatgtggcgcgactactactgcgagctctcgcccttcgagttccgcctctacctg
aacgcagaggagcgcacttgctgcgacaactgctccctgctgcgttgcgaggacgcccgc
gtcacctcggccgagggccgcttcgacctggccttcccagggaaaaggctcctcatgcgg
gcggccaaccgcgatgaggcagaggactgggtggaccgcattgctgaagccgtcaacaag
tgccgcccgcttcaccgcctcgatgaccagtgggaggtgctgcagcccactgacagcagt
gtaaccccggatgagcccccaaaatcttccccttcgtccccctcctccgtacccgccagt
cccgagcgagggggggctgtggttgagcaggagctgccactggagctggactggacgcgt
cccacagacccagagtcagacgccattaaggagacggtgctgtacttctcacaggactct
gaggctcgcaactggactcctctggtcttctccctctccttagagactctcaagggcttc
cggatgcaggacgggcagaaggtgctgtgctgcacccaccccatcgaggggatccgggac
gtggtcccagacgtttctctgggcggaccagccttctttagggtggtaacggccaaggat
acgctcaagctgagggccaagagctctgaggaggcacgtgcctggaggggcctcatcagg
ggagccctggactcctacctggagagtggagaagactgggagcctgagagccctggggtg
gcccctggggcaggggggaacatccacagactggtgcagcatagactgaagggggacggg
gtgctgctggcccatctatgcacagtgcccacagagaaggggctggaccttcaggccttc
aagtgtgcaggttgtccaaaggcgataggcgtctcccgagggaaagccagactgtgtgag
ttctcagggcagtactactgcgacacttgtcaccagggcgacgccatcgtcataccctcc
cgcatggtgcacaactgggacctcgcgcctcgagaggtctccagacaggctgttaagctg
ctggctcagattgaacatgagccgctgctcaaccttgaccttttaaaccctgacctgtgg
gagcatgccgaggccatggcccaggcacagagcctcagacagcggctgcgtctcctagga
gactacctgctcacctgccgcagcggagcatgcaagaacatccagagcagactgggccca
aggacatacttgttagaatcaagccatctctacagcgtcatggacttaagacagatagcg
gagggaatgtatgtggcctacctgaacacgttgatccagtttgcctccaaccacgtccac
cactgtgacctttgcacgcagaggggcttcatctgccagatctgtcacgccagtgacatc
atcttccccttccagttcgacaccaccaccagatgtaaagagtgtaaggccgtgtttcac
gcaacctgcaaggccaagtcgccttcctgtccacgatgcctgcggcttcagaggtacctc
gagagagatctgcaggactaa
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