Coregonus clupeaformis (lake whitefish): 121568348
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Entry
121568348 CDS
T08357
Name
(RefSeq) major histocompatibility complex class I-related gene protein
KO
K06751
MHC class I antigen
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04218
Cellular senescence
cclu04514
Cell adhesion molecules
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121568348
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121568348
04145 Phagosome
121568348
09143 Cell growth and death
04218 Cellular senescence
121568348
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121568348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121568348
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121568348
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121568348
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Antigens
121568348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
BARF1_ig2
MHC_I_3
DUF4224
Phospholamban
Motif
Other DBs
NCBI-GeneID:
121568348
NCBI-ProteinID:
XP_041734834
LinkDB
All DBs
Position
6:17167921..17175613
Genome browser
AA seq
328 aa
AA seq
DB search
MITTILISFMVFSIVAPQSLHRHCITTQGSLYPKNIQLVMIDDVIVYYYNSSAEQEAVMP
EWLNHPEGIEFWQELNRNLKFNRYVMDTAVRVTSEHYNHSHDHFYQAHGRCGWKSDGTTE
AFMSHAYDGKDFVSFDVSTRKWTAAVSHAVFYKRKRETDLEDLVRLVIHYESVCIRWLKK
LLQFSVTVRESKVPGVSLFERLPHGNSEVEVTCHVTGFYPRAVQVEWLGTEGLPLVDGVS
SGEVLPNGDGSYQLRKSLTLPQGAQYTQHYSCLVLHSSVAGNITVNWDPKKNLANVLIAI
GIIVSVVLILAVLVKYLVWRRAVGQSQS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgataaccacaattttaatttcattcatggtgttctccatcgtagcccctcagtctctt
catcgccactgcatcacaacccaagggtccttgtatccgaaaaacatccagttggtaatg
atagatgatgtcattgtctattactacaacagcagtgctgaacaagaggccgtgatgcca
gaatggttaaaccaccctgagggaattgaattctggcaggagcttaatcgaaatctgaaa
tttaatcgatatgtaatggatacggctgtgagagtaacaagtgaacattacaatcattca
catgatcacttttaccaagctcatggacgctgtggatggaagtcagacggaaccacagag
gcgtttatgagccatgcatatgacggcaaggactttgtcagcttcgatgtatcgaccaga
aaatggacagctgcagtttcccatgctgtattttacaaaagaaaaagggaaacagatttg
gaagatcttgttaggctggtcattcattacgaatctgtatgcatccgttggctgaagaaa
ctgctacagttcagtgttacagttcgagaatccaaagtccctggggtgagtctgtttgag
agactgcctcatggcaactccgaggtggaggtcacgtgtcatgtgacagggttctaccct
cgggcggtgcaggtggaatggctggggacagagggacttcccctggtggacggggtgagc
agtggggaggtgctgcccaacggagacggttcgtaccagctgaggaaaagcctgactctc
ccacagggagcccagtacacccaacactacagctgcctggtgctccacagcagtgtagcg
gggaacatcacagtaaactgggatccaaagaagaacctggccaatgtgctgatagccata
ggcatcattgtatctgttgtcttaatacttgctgtcctagtcaagtatttagtatggagg
agagcagttggtcagagtcaatcttaa
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integrated database retrieval system
