KEGG   Coregonus clupeaformis (lake whitefish): 121569034
Entry
121569034         CDS       T08357                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03420  Nucleotide excision repair
cclu04110  Cell cycle
cclu04114  Oocyte meiosis
cclu04120  Ubiquitin mediated proteolysis
cclu04141  Protein processing in endoplasmic reticulum
cclu04310  Wnt signaling pathway
cclu04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121569034
   04120 Ubiquitin mediated proteolysis
    121569034
  09124 Replication and repair
   03420 Nucleotide excision repair
    121569034
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    121569034
   04350 TGF-beta signaling pathway
    121569034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121569034
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121569034
Enzymes [BR:cclu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     121569034
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   121569034
  Multi subunit type E3
   SCF complex
    Ring finger protein
     121569034
   Cul2 complex
     121569034
   Cul3 complex
     121569034
   Cul4 complex
     121569034
   Cul7 complex
     121569034
   Cul8 complex
     121569034
   Cul9 complex
     121569034
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      121569034
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      121569034
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 121569034
NCBI-ProteinID: XP_041735555
LinkDB
Position
7:complement(21558102..21561191)
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgataccccaagcgccaccaatagtggcgcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgctatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagttccagaaatatggacactag

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