Coregonus clupeaformis (lake whitefish): 121569188
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Entry
121569188 CDS
T08357
Name
(RefSeq) DNA nucleotidylexotransferase isoform X1
KO
K00977
DNA nucleotidylexotransferase [EC:
2.7.7.31
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121569188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121569188
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.31 DNA nucleotidylexotransferase
121569188
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
121569188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
DNA_pol_B_palm
BRCT
NTP_transf_2
HHH_5
Adhesin_E
Motif
Other DBs
NCBI-GeneID:
121569188
NCBI-ProteinID:
XP_041735872
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All DBs
Position
1:43881205..44102910
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AA seq
499 aa
AA seq
DB search
MNHAGMLVRVKKRKRPVEAGARGQVEVKFKEVTLYLVERKMGSSRRNFLTSLARSKGFRV
EDVLSDEVTHVVAEDNQAEGLLAWLRGHGLRDISRLAVLDISWFTDSMREGRPVTVETRH
RIQNTVTDCSPPTAVANVSQYACQRRTTTENHNKIFTDVMEELAESSEFNESKGPCLAFR
QAASVLKSLPSAVRCLGAIQGLPWLGEHTKAVMEEILTFGRSFKVEEIRCDERYQALKLF
TSVFGVGPKTAEKWYRRGLRSLKEILTEPNIQLNRMQRAGFLYYSDISKAVSKAEAEALG
CIIEETVHWIAPDAVLALTGGFRRGKEYGHDVDFLLTVPEMGKEEGLLLHVIDRLRDQGI
LLYCDHQGSTFDVSKLPSCRFEDMDHFQKCFLILRLEEGQVEGERGLQRDPGDSRGWRAV
RVDLVAPPVDRYAFALLGWTGSKQFGRDLRTFARKERQMLLDNHALYDKTKKLFLPATTE
EDIFAHLGLEYVEPWQRNA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatgctggcatgctagtgcgtgtgaagaagaggaagaggccagttgaggctggt
gctcggggtcaggtagaggtcaagttcaaggaggtgacgctgtatctggtggagaggaag
atgggcagcagtagaaggaactttctgaccagtctggccaggtcaaaaggctttagagtg
gaagatgtcctcagtgatgaggtcactcacgtggtggcggaggacaaccaggctgagggg
ttgttggcgtggctgaggggacatggtctaagggatatctccagactggcggtgctggac
atctcctggttcacggacagcatgagggaggggagacctgtcacagtggagaccaggcac
cgtattcagaacacagtgacagactgttctccacccactgctgtggccaatgtttctcaa
tacgcatgtcagagacggacaaccacggaaaatcacaacaagatattcacagatgtgatg
gaggagctggctgagagttctgagttcaatgaaagtaagggtccatgcctggcattccgg
caagcagcctcagtcctgaagagtctgccgtcagcagtgcgctgtctgggggccatccag
ggcctcccctggctgggggaacacaccaaagctgtcatggaggagattcttacatttggc
cgctcttttaaagtggaagagatacggtgtgatgaacgatatcaagcgcttaagctgttc
accagtgtgttcggggttggacccaaaacagctgagaagtggtaccgcagagggctacgc
tcactcaaggagattttgaccgagcccaacatccagttgaacaggatgcagagagctggt
ttcctgtattatagtgacatctccaaggctgtcagtaaagccgaggccgaagctcttgga
tgcatcatcgaagagacggtccactggatcgcacccgatgctgtactggctctgacaggt
ggctttcgcagggggaaggagtatgggcacgatgtggacttcctcttgactgtgcctgag
atggggaaagaggaggggctactgcttcatgtgattgacagactgagggaccagggcatt
ctgctgtactgtgatcaccagggctccacgtttgacgtgagcaagctgcctagttgcagg
tttgaggacatggaccacttccagaagtgcttcctgatcctgaggctggaggagggccag
gtggagggggagagagggctgcagagggacccaggggacagcaggggctggagggccgta
cgggtggacctggtggccccacctgttgaccgctacgcctttgccctcctgggctggacc
ggctccaagcagtttgggagagatctgaggacatttgcccgaaaggagaggcagatgctt
cttgacaaccatgccctgtatgacaaaacgaagaaactattcctaccggcgactactgag
gaggacatctttgcccatctgggtttggagtatgtggagccttggcagagaaatgcataa
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