Coregonus clupeaformis (lake whitefish): 121569638
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Entry
121569638 CDS
T08357
Name
(RefSeq) suppressor of cytokine signaling 7 isoform X1
KO
K04699
suppressor of cytokine signaling 6/7
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121569638
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121569638
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Gene cluster
GFIT
Motif
Pfam:
SOCS_box
SH2
Motif
Other DBs
NCBI-GeneID:
121569638
NCBI-ProteinID:
XP_041736696
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Position
35:16350873..16381412
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AA seq
860 aa
AA seq
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MNNAQDMSPDFVLMRLVSAAEYDRLDEENLTSGGGVVSGFGKAVLGNHGNNINNGFEFDP
NNPTAGPAIPSNPSPHYSSQVESRTGDFDSGFMLTRPSASDAPQPPGFAVAQRFDFPHGA
GRGSRAQLMVFQNLLRTSDGILECGLEQPPGFQVSEAEKQEASSACVMMTSDNNMDVQHQ
RLQWHPIMKLSKVVADAGDLAGEGDGLCHQHRLVTDAMDWPPLLDKSLRFGILDPRKTCS
TGDTNYHHHLDDTVLNLARRLGELGQASEMLLKEGGEMPRCSCQSILASATVGMGPGEDP
SETSDALLVLEGLGSEEVGELGMGGEEFKGGAPRQEGEMETGQDGQGAFSSGSLTGLMRQ
VHRLAGEACNCDPQVCPSPLDTLGSAAALTSSSLSLASSNITRQQAVEASATLSGTLPSK
DPPSQTSQSQPQSRATTPKLGVMLRAASPLVVEGAAGGEKTTRGKSRKGSLKIRLSKLFR
TKSSSGSSHLLDKRPSLASSTSSGGSLMDVWGSGSTNTDQDTGSKLQLSRPQSAFSPVAF
SPAFTGNCETVSLVDVDISRRGVNSLHPPTPPPPPRRSLSLLDDFGGPQPGPFLESGVGA
SMQSLPLRPPLPSHAFIQHSLSLNDTFLRGLPRPISLPGNGQNPSRVDQRPLLCPLSRPD
ASSFATSLRELEKCGWYWGPMNWEDAEMKLKAKPDGSFLVRDSSDPRYILSLSFRSQGVT
HHTRMEHYRGTFSLWCHPKFEDRCHSVVEFIERAIMHSKNGKFLYFLRSRVPGLPPTPVQ
LLYPVSRFSSVKSLQHLCRFCIRQLVRIDHIQELPLPTPLIVYLRKFYYYDPEEEMYMSI
KETGRDTTIQPATAQPESQT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgcgcaagatatgtctcctgattttgtcttgatgcgcttggtttctgcggct
gaatatgaccgattggacgaggagaatttgacgtcgggcggtggagtggtttccggattc
gggaaagctgtcttgggtaatcatggcaacaatatcaacaatgggtttgaatttgatcct
aacaaccccacagcaggcccggcgattccgagcaatccctccccgcactatagttcacag
gtcgagagcaggacgggagactttgacagcggctttatgctgactcgaccctcagcgtct
gacgcgcctcaaccacccggatttgccgtggctcagcgcttcgattttcctcatggcgcg
ggcagaggttcgcgggctcagctcatggtgtttcagaacctccttaggacaagcgacggt
attttggaatgcggtctcgagcaacctcctggcttccaggtaagtgaggctgagaaacag
gaagccagttctgcctgtgtcatgatgaccagtgacaacaacatggatgtgcaacaccag
aggcttcagtggcaccccatcatgaagctgtccaaggtggtcgcagatgccggtgacctg
gctggagagggagatggcctctgccaccagcaccgcctggtcactgacgccatggactgg
cctccgctcctggacaagtccctccgctttggcatcctggaccccaggaagacctgttca
acgggggacacaaactaccaccaccacctggatgacactgtgctcaacctggcccggagg
ctgggggagctgggccaggcctcggagatgctgctgaaggagggaggagagatgcctcgc
tgttcctgtcaaagcatcctggcttcggcaacggtgggcatgggccccggagaggaccct
agtgagacaagtgacgccctcctggtgctggagggcctgggctcagaggaagtgggggag
ctggggatgggcggggaggagtttaaaggtggtgcccccaggcaggagggcgagatggaa
acggggcaggacgggcagggggctttctccagcggttccctcacagggctaatgaggcag
gtacacaggctggccggggaggcctgtaattgtgacccccaggtgtgtccctcccctttg
gataccctgggctctgctgcagccttaacatcatcttccctgtctctggcctcctctaac
atcacgagacagcaggcagtggaagcctccgccaccctttctggcaccttaccttcaaag
gacccccccagccaaacctcccagtcccagccccaaagcagggccaccacgccgaagtta
ggggtgatgttgcgagctgcctcacccttagtagtagagggagcggcagggggcgagaag
acgaccagagggaagtccaggaaaggctctctgaagatccgtctgagcaaactattccgg
accaagagcagcagcggctccagtcatctactggacaagaggccctcgctggcctcctcc
acctcctctgggggcagcctgatggatgtgtggggctccggatccaccaatacagaccag
gacacagggagcaaactccagctctccaggccccaaagtgccttctccccggtggccttc
agtcctgccttcaccggtaattgtgagactgtgtccctggtagatgtggatatttctcgt
agaggggtgaactctctgcaccccccgacacctccacctccgcccagacgaagcctcagt
ctgctggatgactttggtgggccgcagcctggtcctttcctagagagtggcgtgggggcc
tccatgcagtcgctgcccctacggccgcctcttccctcccatgccttcatccagcatagc
ctcagcctcaatgatacgttcctgcggggtctcccccggcccatctcgctgcctggcaac
ggccagaacccgtcccgggtggaccagcgccccctgctgtgcccactgagccgccccgat
gccagcagctttgccaccagcctccgagaactggaaaaatgtggctggtactggggtcct
atgaactgggaggatgcagagatgaagctgaaggccaagccagatggctcgttcctggtg
agggacagctctgacccccgctacatcctcagcctcagcttccgctcccagggagtcaca
caccacacacgcatggagcactacagaggaaccttcagcctctggtgtcacccaaagttt
gaggaccgctgtcattcggtggtggagtttatagaacgggccatcatgcactccaagaat
ggaaaattcctctacttcctgcgctcacgggtcccaggcctccccccgaccccggtccag
ctactgtacccagtgtcccgcttcagcagtgtcaagtccctgcagcacctctgtcgcttc
tgcattcgccagctggtccgcatagaccacatccaggagctcccgctgcccacgcccctc
atagtctacctgcgaaagttctactactacgatcctgaggaggagatgtacatgtcaatc
aaggagactgggcgggacacgaccatccaaccggcgactgcccagccagagtctcaaacg
tag
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