Coregonus clupeaformis (lake whitefish): 121570059
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Entry
121570059 CDS
T08357
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K09290
tropomyosin 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04814
Motor proteins
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121570059
04820 Cytoskeleton in muscle cells
121570059
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121570059
04261 Adrenergic signaling in cardiomyocytes
121570059
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121570059
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
121570059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
DUF745
PUMA_CC
DUF3450
TMF_DNA_bd
DUF16
XhlA
Crescentin
SlyX
NBP1
ATG16
Fib_alpha
Exonuc_VII_L
Lebercilin
FPP
EzrA
DUF1664
DUF7518
Laminin_I
Fez1
Motif
Other DBs
NCBI-GeneID:
121570059
NCBI-ProteinID:
XP_041737447
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MEAIKKKMLMLKMDKETALEAADQSEIDKNAAEDKSKQHDDALIQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEMQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELAEGKCAELEEELKNVSNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSICASQRQGGECQHPRHP
GQDPGGPQQLLSGYWSCGLASSSSPPPLIAPPPHLWSCLSVCAG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgctgatgctgaagatggataaggagactgctctggaa
gcggctgaccagtccgagattgacaaaaatgcagctgaggataagagcaagcagcatgac
gatgcgttgatccagatgcagaagaagctgaaggggactgaggatgagctggacaaatac
tctgaggccttgaaggatgcccaggagaagctggaggttgcagacaagaaagctgcagat
gctgaggctgaggtggcctctctgaacaggcgtatccagctggttgaggaggagttggac
agggcccaggagagactggccaccgctctgcagaaactggaggaggcagagaaagctgca
gatgagagcgagaggggtatgaaggtgattgagaacagggcctccaaggatgaggagaag
atggagatgcaggagattcagctgaaggaggccaagcacatcgctgaggaggccgaccgc
aagtatgaggaggtggctcgtaagctggtgatcattgagggtgatctggagcgtacagag
gagagggcggagctggccgagggcaaatgcgccgagttggaggaggagctgaaaaatgtc
agcaataacttaaagtccctggaagcccaagctgagaagtactcccagaaagaggacaag
tatgaggaggagatcaagatcctgactgacaaactcaaagaggctgaaacccgtgctgag
tttgctgagagatcagtggccaaactggaaaagaccattgatgacctggaagatgagctc
tatgcacagaaattgaagtacaaagccattagtgaggagttggaccatgccctcaatgac
atgacctccatatgcgctagccaacgccaaggaggagaatgtcaacatccacgccaccct
ggacaagaccctggaggacctcaacagcttctgagtggctactggagctgcggcctggcc
tcctcctcttcaccaccacctcttatcgctccaccccctcacctctggtcctgtctctct
gtctgtgctggctga
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