Coregonus clupeaformis (lake whitefish): 121571065
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Entry
121571065 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 2
KO
K10159
toll-like receptor 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04145
Phagosome
cclu04620
Toll-like receptor signaling pathway
cclu05132
Salmonella infection
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121571065
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121571065
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121571065
09171 Infectious disease: bacterial
05132 Salmonella infection
121571065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121571065
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121571065
04054 Pattern recognition receptors [BR:
cclu04054
]
121571065
04090 CD molecules [BR:
cclu04090
]
121571065
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121571065
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Phagocytosis
Toll-like receptors
121571065
Exosome [BR:
cclu04147
]
Exosomal proteins
Exosomal proteins of breast milk
121571065
Pattern recognition receptors [BR:
cclu04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
121571065
CD molecules [BR:
cclu04090
]
Proteins
121571065
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Hyaluronan
Cell surface receptors
121571065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
TIR_2
LRR_4
LRR_8
LRR_Zer-1
LRRCT
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
121571065
NCBI-ProteinID:
XP_045077712
LinkDB
All DBs
Position
8:8728756..8743083
Genome browser
AA seq
544 aa
AA seq
DB search
MFQNATMTDEAIIHFLKVMDRAPVEFVGSEDVMFQGTGSWESAGQTRHDSLDTVYFRNIE
IMNVFKFTSFLFLGFLLQNLRQISIINCKVYVMPCLTSRMLPHLEYLDLSSNLLTDLTLT
ESLCGGDGTLSNLRVLNVSDNALKSLSLLSKLVTRLNKLVHLDISQNAYTSMPSTCSWPQ
TLIHLNLSWAKLRRVTPCLPLTLEVLDLGRNDLTAFHSVALPALRELHLSGNKLMHLPHG
WLFPSLEVLLIQSNTLNMFXTVDLRLYGRLRALQAGQNRFVCSCEFVSFMVWRWGGAVEG
SVELTDRLDNYLCDSPLPLQGQRVDRVRLSPFQCHRVLLVSALCGCILISGILLVILLWK
LHAVWYMSMMWAWLRAKRNSGNRKRRDAAGNADPLCYDAFVSYSERDAEWVEEFLVPELE
NSQPPLSLCLHKRDFLPGHWIMDNIINAMERSRRTLFVLSEHFVHSEWCRYELDFSHFRL
FDGNAEAAVLVLLEPISKDDVPKRFCKLRKLMSSRTYLEWPEEDERRAEFWSNLRLAVRG
GDEL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgttccagaacgcaaccatgacggacgaggccatcattcacttcctgaaggtcatggac
agggctccagtagagttcgtggggtcagaggacgtgatgttccagggtacaggctcctgg
gagtcggctggacagacgcgtcatgacagcctggacacggtctacttcagaaacatagag
atcatgaatgtctttaagttcacctccttcctgttcctgggatttctactgcaaaacctc
cgacagatctctatcattaactgtaaggtgtatgtgatgccgtgtctgacctctcgcatg
ttgccccacctggagtacctggacctgagcagtaatctactgaccgacctgaccctgacg
gaatctctgtgtggcggggatggaaccctgagcaatctcagagttctgaacgtcagcgac
aacgccttaaagtccctgtccctcctcagcaaactggtcacccgtctgaacaaactagtc
cacctggacatcagtcagaacgcctacacctccatgccctccacctgctcctggccccag
accctgattcacctcaacctctcctgggctaagctacggagggtcaccccctgtctgccc
ctgaccctggaggtcctggatctgggacgcaatgacctgacagccttccatagtgttgct
ctcccggccctgagggagctgcacctctctgggaacaagttgatgcatctgccccatgga
tggttgttccctagcctggaggtcctcctgatccagagcaacactctcaacatgtttngg
accgtggacctcagactctacgggaggctccgagcactgcaggccggacagaacaggttt
gtgtgttcctgtgagtttgtctccttcatggtctggaggtggggtggagcagtagagggc
agtgttgagctaacagacagattggataactacctttgtgactcaccgctgcccctgcag
ggccagagggtcgaccgcgtccggctctcaccgttccaatgccaccgcgtcctcctcgtg
tccgcactctgcggctgtatactaatttccggaatcctgttggtgattctgctgtggaag
ctccacgcggtgtggtacatgagtatgatgtgggcgtggcttagagccaaacggaattcc
ggtaaccggaagcgccgggatgcagcagggaacgccgaccccctctgctatgatgcgttc
gtgtcgtacagcgagcgagacgcagagtgggtcgaagaattcctggttccagagctggag
aattcccagcctccactctccctctgcctccacaagagagacttcctgccaggccactgg
atcatggacaacattatcaatgcaatggaacgcagccgacgcacactcttcgtcctgtca
gaacactttgtccactccgagtggtgccggtacgagttggacttttcccacttccgtctg
tttgacgggaacgcagaggcggccgtcctggtgctcctggagcccatctccaaggacgac
gttcccaaacgcttctgcaagctccgcaagttgatgagctcccgtacctacctggagtgg
cctgaagaggacgagaggagggcagagttctggagcaacctccgactggccgtgagggga
ggagacgagctgtga
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integrated database retrieval system
