Coregonus clupeaformis (lake whitefish): 121571369
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Entry
121571369 CDS
T08357
Name
(RefSeq) protein FAM149B1 isoform X1
KO
K24653
primary cilium assembly protein FAM149
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cclu03037
]
121571369
Cilium and associated proteins [BR:
cclu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121571369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3719
Motif
Other DBs
NCBI-GeneID:
121571369
NCBI-ProteinID:
XP_041738711
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Position
1:complement(60307571..60321058)
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AA seq
729 aa
AA seq
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MHDERGHSGGHERIKTEKRIMISRYSRRPVSHNLEIRGLSRSSLDHHPLPEEVDDDFLPQ
RLLHDLQEAVSTYNSSETTSAASRRSDCPTATTGDTTRSWSGIHSYTGTGISTERSSVFS
WGYDEFDKAASRQVQQMFEEIDDKLYEGRGGAHLRGLQDECHQWAFRFPHLRIQGSQLVC
PSDEGFQWYATSGKGTSTASSSSAGQNDSISSKPQDKDKPSTSKDLCVQGRKAMLSRPSA
DVDHPPGTPSGSRGHDRPRVIEAEGLMEEYLAFDCRDMDDEWERGWVGAARRRNCLPPVS
PYRCRKQAVLDLLFDDVWRELFGWMEELVRRHWEGCVSDYEKNAVNFSPSQSDAQNPFLL
LSTLPTLLPRLGQSMVPQLTGSLQTQTTKSRGSKYKPRRKSKMQKKPSTVCNSHLEAKCC
RSTPSTASSRLPVEAAVTHHNLNELIVIHGIPLQQRNLGVMERAQYGDHKDPEERLVINR
PGSTVILSSKPRPRRVLEQSSSSLSRPAQSARRRNLPPRTLLPLVPSLTQSSATRTMDEV
IRGTRLPTASDRLASPPMPLSRNTLLPPIGTGEAEPMHSGQHFRPTQRHRDSSSRAHSAV
TDEAGSLLPRDRLHQLDVFSRPNTTHTYRSDTPYRRSFTVLDNIGQGRPGRASVGTDSLG
IGVTGISLGISSSSFLDSFTHHPLGHSPIEDEEEPDTQAPPPALLVPVSVPASSHSRGGF
MARSSRPGL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatgagagaggacactcaggagggcatgagcggataaaaacggagaaaaggata
atgatttcgcgatacagtaggagacccgtatcgcacaatcttgagattcgtggcttatcc
cgaagcagccttgaccatcaccctctcccagaggaggtagacgatgacttcctcccccag
cgcctcctccatgaccttcaggaagccgtctccacttacaacagctcagagacgacatct
gcagcctctcgccggtcagactgtccaacggccactactggagacacgacgcggtcctgg
tctgggatccacagctacacagggacgggcatctctacagagaggagctctgtcttctcc
tggggctatgatgagtttgacaaggcggcgtcgcgacaggtgcagcagatgtttgaggag
attgacgacaagctttatgaggggcggggtggggcacatctacgggggctgcaagatgag
tgtcatcagtgggcattcaggttccctcacctacggattcagggtagtcagctggtgtgt
cccagtgacgagggcttccagtggtacgccacctcagggaaggggaccagtacagccagc
agcagttcagctggacaaaatgacagcatcagtagcaagccccaggacaaggacaagccc
agcacgagcaaagatctgtgtgtgcagggtaggaaggctatgctgtccaggcccagtgcg
gatgttgaccacccccctggtactcccagtggatccagaggtcatgacaggcccagggtg
atcgaggctgaaggcctgatggaggagtacctggcctttgactgcagggatatggatgac
gagtgggagcgggggtgggtgggggctgctcggcggcggaactgcctgcctcctgtgtct
ccctaccgctgtcgcaaacaggcggtccttgacctgctgtttgacgatgtgtggcgagag
ctgtttggctggatggaggagctggtccgcaggcactgggagggctgtgtctcagattat
gagaaaaatgcagtgaacttcagcccatcccagtcagatgctcagaaccctttcctgctc
ctgtccacactgcccaccctgctccccaggctgggccagagcatggtgccccagctaaca
ggaagcctgcaaacccagaccacaaaatcaaggggctcaaagtacaagcccagacggaaa
tccaaaatgcagaaaaagccatccactgtatgcaactctcacctagaggcaaaatgttgc
agatctacgccatccacagcgtccagtcggctcccagtagaggcagcggtgacacatcac
aacctcaacgaactcatagtcatccatggcatccccctgcagcagaggaacctgggagtg
atggagagagcccagtatggagaccataaggaccctgaggagaggttggtgatcaatcga
ccagggtccacagtgattctgtctagcaagccccgtcctcgccgggtgctagagcagagc
tcctcctccctgtcccgccctgcccagtcggcgcgacgccgtaacctgcctccacgcacc
ctcttgcccttggttcccagcctgacgcagtccagtgccaccaggaccatggatgaggtc
atccgtgggacacgcctacccacagccagtgaccgcctggcctctcctccgatgcctctg
agcaggaacacactccttcctcccatcggcacaggagaagctgagcccatgcactctgga
cagcacttcagacctactcagcggcatagagactcgtccagtcgtgcccacagtgctgtt
acagacgaagctggtagtttgcttcctcgggatcggcttcatcaattggacgtattctcc
cgtcccaacaccacccacacctacaggtcggacaccccttaccgccgctccttcacggtg
ctggacaacattggacagggacgtcctggcagggcatctgtgggtacagactctctgggc
atcggagtgacgggcatcagtctgggcatcagcagctcctccttcctggactccttcacc
caccaccccctgggccactcccccatcgaagatgaggaggagcctgacacacaagcccct
cccccagctctactggtgcctgtttcagtcccagcaagctctcacagccggggtggcttc
atggcccgcagtagcagacctgggttgtag
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