Coregonus clupeaformis (lake whitefish): 121571574
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Entry
121571574 CDS
T08357
Name
(RefSeq) major histocompatibility complex class I-related gene protein
KO
K06751
MHC class I antigen
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04218
Cellular senescence
cclu04514
Cell adhesion molecules
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121571574
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121571574
04145 Phagosome
121571574
09143 Cell growth and death
04218 Cellular senescence
121571574
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121571574
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
121571574
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
121571574
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121571574
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Antigens
121571574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
Psg1
C2-set_3
EphA2_TM
EMC4
Ig_2
PepSY_TM
DUF1180
ETRAMP
Motif
Other DBs
NCBI-GeneID:
121571574
NCBI-ProteinID:
XP_041739044
LinkDB
All DBs
Position
35:complement(41301105..41320501)
Genome browser
AA seq
348 aa
AA seq
DB search
MKGFILLVLGIGILHCASAATHSLRYVYTATSGIPDFPEFVTVGLVNAEPISYYDSVIRR
ETPRQDWMAKTEGSDYWERQTQISIADEQTFKAGIDNIKLRFNQTGGVHIIQKMYGCEWD
EDTGVTEGFKQYGYDGEDFVAFDLKTKTWIAPTPQAVISKHKLDRNIANNEQKKHYLTQT
CIEWLKKYVDYGKSTLQRTVPPLVSLLQKTPSSPVTCHATGFYPSGVMVFWQKDGQDQHE
DVENGETLHNDDGTFQKSVHLTVTPEEWKNNKYQCVVQVTGINEDFIKVLTETNRALIIG
VAVALLAVVAVVVGVVIWKKKNKNKKGFLPTSTSDTDSDNSGKVVQKT
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggttttatccttctggttctgggaataggcattcttcattgtgcatctgctgct
acgcattcactgcgttatgtgtacactgcgacctcaggaataccagacttccctgagttt
gtgactgttgggttggtgaatgcagagcccatctcgtactatgacagcgtcatccgcaga
gaaactcccagacaggactggatggccaagactgaggggtctgactactgggagagacag
actcagatctccattgctgacgagcagaccttcaaagccggcattgataatattaagctg
cgcttcaatcagactggaggtgtgcatattattcagaagatgtacggctgtgagtgggat
gaggacactggagtcacagaggggtttaagcagtatggatatgatggagaggatttcgta
gcatttgacctgaagaccaagacatggatcgccccaacaccacaggcagtcatcagcaaa
cacaagttggacagaaacatagctaacaatgagcagaagaaacactacctcacccagacc
tgcattgagtggctgaagaagtatgtggactatgggaagagcactctgcagaggacagtc
cctcccttagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctaca
ggtttctaccccagtggagtcatggtgttctggcagaaagacggacaagatcagcatgaa
gatgtggagaatggagagactctccacaacgatgatggaaccttccagaaaagcgtccac
ctcacagtgacgcctgaggaatggaagaacaacaagtatcagtgtgtggttcaggtcact
ggtatcaatgaggacttcatcaaggttctgactgagaccaacagggccctcatcattgga
gtagctgtagctctcctggccgttgttgctgttgttgttggggtcgtcatttggaagaag
aaaaacaagaacaagaaaggctttcttccaaccagcacttccgacactgactctgacaac
tctgggaaagttgtccagaagacttga
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