Coregonus clupeaformis (lake whitefish): 121571672
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Entry
121571672 CDS
T08357
Name
(RefSeq) radixin-like isoform X1
KO
K05762
radixin
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04517
IgSF CAM signaling
cclu04530
Tight junction
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121571672
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121571672
09142 Cell motility
04810 Regulation of actin cytoskeleton
121571672
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121571672
04147 Exosome [BR:
cclu04147
]
121571672
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
121571672
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
121571672
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ERM_C
ERM_helical
FERM_M
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
121571672
NCBI-ProteinID:
XP_041739203
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Position
40:22264425..22312042
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AA seq
587 aa
AA seq
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MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYTDSKDYSTWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDENYCPPE
TAVLLASYSVQAKYADYNRDIHKPGYLTSDRLLPQRVLEQHKLTKEQWEDRIQTWHEEHT
GMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPVSQSTRKVGDQSTGKDFVFYAPRLRINKRILALCM
GNHELYMRRRKPDTIEVQQMKAQAREEKHHKQMERAQLENEKKKREHAEKEREKIEKEKD
ELIERLRQIEGQTLKAQKELEEQTRRALELDQERKRAKEEAERLERERQAAEEAKAALVK
QAADQMKNQEQLAAELGEFTAKIALLEEAKRKKEDEATEWQHKAISAQEDLEKTKEELKS
VMSSPPAPEQDEQDETNAEGSTELHSDGVTSHRREEERVTEAQKNERVKEQLQALSSELA
QARDDTKKTQNDMLHAENVKAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaccgatcaatgtgcgggtcaccaccatggatgcagagctggagtttgccatc
cagcccaacaccaccggcaaacagctttttgaccaggtggtgaagacagtgggtctccgg
gaggtgtggttttttggcctgcagtacacagacagtaaagactacagcacgtggctcaaa
ctcaataagaaggtgacgcagcaagatgtgaagaaggagaaccctctgcagtttaagttc
agagccaagttcttccctgaggacgtgtctgaggagctcatccaggagatcacacagaga
ctcttcttcctgcaggtgaaggaggccatcctgaacgatgagaactactgtcctccagag
actgccgtgttgctggcctcctactctgtccaggccaagtatgcagactacaacagagac
atccacaagcctggttacctcacctccgaccgcctgctgccacagagagtgttggagcag
cacaagttgactaaggagcaatgggaggacagaatacagacctggcacgaggaacacaca
ggcatgctcagagaggactcaatgatggagtatctgaagatagcccaggacctggagatg
tatggagtcaactactttgagatcaagaacaagaagggaactgagttgtggctgggtgtg
gatgcactgggactcaatatctacgaacacgaggacaagttgacaccaaagattggcttc
ccctggagcgagatcagaaacatctccttcaacgacaagaagtttgtcatcaaacccatc
gacaagaaagccccagtaagtcagtctaccaggaaggtaggggatcagtctaccgggaag
gactttgtattctacgcgccacggttgcggatcaacaagcgtatcctggcgctgtgcatg
gggaaccacgagctgtacatgaggaggaggaagcctgacaccatcgaggtgcagcagatg
aaggcccaggcccgagaggagaaacaccataaacagatggagagagctcagctagaaaac
gagaagaaaaaacgagagcacgcagagaaagagagggagaagatagagaaagagaaggac
gagctgatcgagagactcagacagattgagggacagacgctaaaggcccagaaagagctg
gaagagcagacacgcagggccctggagttggaccaggagaggaagagagcaaaggaggag
gcagagaggttggagagagagagacaggcagcagaggaggccaaggcagcgctggttaaa
caggctgctgaccagatgaagaaccaggaacaactggccgctgagctaggagaattcacc
gccaaaatcgctctgcttgaagaggccaagaggaaaaaagaagatgaagcgacagaatgg
caacacaaagccatctcagcccaggaggacctggagaagactaaagaggagctgaagtct
gtgatgtcatcacccccggcgccagagcaggatgagcaggatgagacaaatgctgagggc
agcaccgagctgcacagtgatggggtcaccagccaccgcagagaggaggaacgtgtcaca
gaggcccagaagaacgaacgcgtcaaggaacagctgcaggctctgagttcagagttggcc
caggcgagggacgacaccaagaagacccagaatgacatgcttcatgcggagaacgtgaag
gctgggagggacaagtacaagaccctgcgtcagatccgccagggcaacaccaagcagcgc
atcgacgagttcgagtccatgtga
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