Coregonus clupeaformis (lake whitefish): 121571779
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Entry
121571779 CDS
T08357
Name
(RefSeq) integrator complex subunit 3-like isoform X1
KO
K13140
integrator complex subunit 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121571779
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121571779
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Gene cluster
GFIT
Motif
Pfam:
Ints3_N
HEAT_Ints3_C
Motif
Other DBs
NCBI-GeneID:
121571779
NCBI-ProteinID:
XP_041739392
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Position
8:33542266..33562617
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AA seq
1033 aa
AA seq
DB search
MEPSPAKGKPQGRLLVSTTLDAKDELEERLERCVGIVTSLTNGLSEREANDAITANVCKG
PQQHEEVCLGLFALLLTEPPQAQRCYRDLTLVNRDGMNVILIKINQILMEKFLKLQDVCR
TQLVWLVRELVKSGVIGADGVLMTLMKQIAGGDITSKNLWLAENVLDILVDQREWVLKSG
MLIAMSVYTYLRLIVDHGTPALLVLRQKEVDFCIGLLREKFMECFIIGRDLVRLLQIVAR
IPEMELLWKDLLHNPQALSPQFTGKGLLQLLTARTSRKFLACRLTPDMETKLLFMTSRVR
FGQQKRYQDWFQRQYLSTAESQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTT
CTSNVAASNAKLALFYDWLFFSPEKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRII
PHFFPPLEGQVRQGVFNSLTFIMEKRVLAHLAPLFDNPKLDRELRSMLRERFAEFCSSPS
PPTEGRDEGANEMKMEESVSLEMDNHVLLDKEDGCYDNTEAAFSDDEEEINNKGEGNKKR
EFRFHPIKEAIIEEPADITPYMDQLDDTMKEKVLQLQKGSDTETHCEVMQEIVDLILEED
FDSEQMSTLASCLAELFKGHFRGDVLPDEITEESLEESVCKPVCLVFRNLCQMQEDNSGF
SVLLEMLAELYQKQPKIGYHLLFYLKASKAAMGKMSLYESFAQATALGDLHTCLMMDMKA
CQEDDIRLLCYLTPSIYTEFPDETLRSGELLNMIVAVIDSTQLQELMCHVMIGNLVMFRK
DSVLNILIQSLEWETFEQYSTWQLFLAHNIPLETIIPILQHLKYKEHPEALSCLLLQLRR
EKPSGEMVKMVLSRPCHQEDQFTTSILRHWAAKHDDVLGEHIKALLIKNNNLPRKRQSLR
SSSSKLAQLTLEQILEHMDNLRLNLSNTKNSFFTQTPILQALQHVQASCDEAHKMRFSDL
FSLAEEYEEPSSKPPKSRRKAPASSPRSRKGAATPVSNEEESASSSASEEEDSKPKAPKR
KRKGSSAVASDSD
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggagccttcaccggcaaaggggaaacctcagggtcgcctattggtgtccacgaccctg
gacgcaaaagatgagctggaagagcggttggagaggtgtgtgggaattgtcacttcattg
acaaacggcctgtcggagcgtgaggccaatgatgccatcacagccaatgtgtgtaagggc
ccccagcagcacgaggaggtgtgtctgggactcttcgctctgctgctcaccgagccccca
caggcacagaggtgctacagagacctgaccctggtgaatagggacggtatgaacgtgatc
ctgatcaagatcaaccagatcctcatggagaagttcctcaagctgcaggacgtgtgccgc
acacagttggtgtggttggtgagggagcttgtgaagagtggtgtgatcggagcggacggc
gtcctcatgacccttatgaagcagatcgcaggaggagacatcaccagtaagaacctgtgg
ctggctgagaacgtgctggacatactggtggatcaaagggagtgggtgctgaagagtggc
atgctgatagccatgtcagtgtacacttacctgcgcctcatcgtggaccacggcaccccg
gcactgctggtcctcagacagaaggaggtggacttctgtatcggcctgctccgagagaag
tttatggagtgttttatcattgggagagacctggtgcgtctgctgcagatcgtggcccgt
atcccagagatggagctactgtggaaagacctgctccacaacccccaggccctcagccct
cagttcactggtaagggtttgctgcagctcctgaccgctcgcacatcccgcaagttcctg
gcttgtcgcctcacaccagacatggagaccaaactgctcttcatgacctccagggtgcgt
tttggccagcagaagcgctaccaggactggttccagaggcagtacctgtccacagcagag
agccagtcgctgcgttgcgacctgattcgctacatctgcggcgtggtgcacccgtccaat
gaggtgctgagctctgacatcctgccccgctgggctatcattggctggctgctcaccacc
tgcacgtctaacgtggcagcctccaacgccaagctggccctgttctacgactggctcttc
tttagcccggagaaggacagcatcatgaacatagagcctgccatcttggtgatgcatcac
tccatgaaacctcatccagccatcactgccaccctactggacttcatgtgtcggatcatc
cctcactttttcccccctctggaggggcaggtgcggcagggtgtcttcaactctctcacc
ttcatcatggagaaaagagtgctggctcatctagctcctctgtttgacaaccccaaactg
gaccgggagctgcgctccatgctgagggaacgcttcgcagagttctgcagttctccctca
ccccccacagagggaagggatgaaggtgcaaatgaaatgaaaatggaggagtctgtttcc
ttggagatggacaatcatgttctgcttgacaaggaggacggttgctacgacaacacggag
gctgccttcagcgacgatgaggaggagattaacaacaagggtgagggaaataaaaagcgg
gagttcagattccacccaatcaaagaggccattattgaggagcccgctgacatcactccc
tatatggaccaattggacgacacgatgaaggagaaggtgttgcagttacagaaaggaagt
gacacagagacacattgtgaagtcatgcaggagatagtggacctgatcttggaggaggac
tttgactcagagcagatgtccactctggcctcctgtctggccgagctcttcaagggccac
ttcagaggagacgtgctgcccgacgagatcacagaagagtcgctggaggagtctgtgtgt
aagcctgtgtgcctggtgttcaggaacctgtgtcagatgcaggaggacaacagtggcttc
tcagtgctgttggagatgctggcggagctctaccagaaacagcccaagatcggctaccac
ctgctcttctacctcaaggccagtaaagcagcgatggggaagatgagtctgtacgagtcg
tttgcccaggccacggcgctgggagacctgcacacctgtctcatgatggacatgaaggcc
tgccaggaggacgacatcaggctgctctgttatcttacgccatccatctacaccgagttc
ccagatgagacattgcgcagcggagagctactcaacatgattgtagcagtcatcgattca
acacagcttcaggagctaatgtgtcacgtgatgattggcaatctggtgatgttccgcaag
gattctgtcctcaatatcctcatccagtctctggaatgggagacgtttgagcagtacagc
acctggcagctcttcctggcccacaacatcccactggagaccattatccccatcctgcag
cacctcaagtacaaagaacacccagaagcactctcctgtttgctgttgcaactacgcagg
gaaaagcccagtggggagatggtgaagatggtgctgagtcggccctgccaccaggaggac
cagttcaccaccagtatcctgcgccactgggcggccaaacacgacgacgtcctgggggaa
cacatcaaggccctgctcatcaagaacaacaacctgccacgcaaacgccagagtctgcgc
agctccagcagtaaactggcccagctgaccctggaacagatcctggagcacatggacaac
ctgaggctgaacctcagcaacaccaagaacagcttctttacacagacgcccatcctgcag
gcactgcagcatgtccaggccagctgtgacgaggcccacaagatgagattcagcgacctc
ttttcattggccgaggagtacgaagagccctcctccaagcctcccaagtcacggcgcaag
gcccccgcctcctccccgcggtcgcgtaagggagcggccacccctgttagcaacgaggaa
gagagcgcgtctagcagtgcctcggaggaagaggactccaaacccaaagcgcccaagagg
aagaggaaaggctcatctgcagtggcctcggacagcgactga
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