Coregonus clupeaformis (lake whitefish): 121571839
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Entry
121571839 CDS
T08357
Name
(RefSeq) focal adhesion kinase 1 isoform X1
KO
K05725
focal adhesion kinase 1 [EC:
2.7.10.2
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04012
ErbB signaling pathway
cclu04148
Efferocytosis
cclu04370
VEGF signaling pathway
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
121571839
04370 VEGF signaling pathway
121571839
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121571839
09144 Cellular community - eukaryotes
04510 Focal adhesion
121571839
09142 Cell motility
04810 Regulation of actin cytoskeleton
121571839
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121571839
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121571839
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121571839
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
121571839
Protein kinases [BR:
cclu01001
]
Non-receptor tyrosine kinases
FAK family
121571839
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121571839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Focal_AT
Pkinase
FERM_N_2
FERM_C_FAK1
FERM_M
FERM_F2
Haspin_kinase
Kinase-like
ABC1
GIT1_C
Motif
Other DBs
NCBI-GeneID:
121571839
NCBI-ProteinID:
XP_041739485
LinkDB
All DBs
Position
8:46261796..46424340
Genome browser
AA seq
1177 aa
AA seq
DB search
MQFCENSGCWPAVGPERERAGGPTHMATSPGCSLFPMCWAAEYDRHLAHSKGMATAYLDP
NLNHALAGGAKSRLSAGTATATERAPGAPDRVLKVFHHFESNSEHSTWASNIRHGDATDV
RGIIQKILDIHKVKCVACFGLRLSHSQSGQVHWLHPDMGVSHVREKYEQNRSQEEWRYEL
RIRYLPKGFLHHFSEDKPTLNYFYQQVKNDYMVEIADQVEQDIALKLGCLEIRRFFREMR
GNALDKKSNYELLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQTFKQFANMNDDQSILKFL
EILAPVYRYDKECFKCALGLSWVIQVELAIGPEEGISYLTDKGSTPTHLANFTQVQNIGY
SVMEDKERKGMLQLNVAGAAEPLTVTTPSLTTAENMADLIDGYCRLVNGTTQSFIIRPQK
EGERALPSIPKVPNNEKRIVEGVVRSAGVRAISVSDSVNSVTPTPPKPAKARRFLLPFVF
CAHDSPPKEDCSGDETDDYAEIIDEDDTYTMPSTTSLYPNRPAVSYGVDEARDYEIQRDR
IELGRCIGEGQFGDVHQGVYNSPENPTLNVAIKTCKNCTSDSVREKFLQEALTMRQFDHP
HIVKLIGVITENPVWIIMELCTMGELRSFLQVRKYNLDLSTLILFSHQLSTALAYLESKR
FVHRDIAARNVLVSSTDCVMLGDFGLSRYMEDSSYYKASKGKLPIKWMAPESINFRRFTS
ASDVWMFGVCMWEILMYGIKPFQGVKNNDVIGRIENGERLAMPHNCPPTLYSLMTKCWAY
DPSKRPRFTELKTQLSTILEEEKAQQEERLRMEMRRQVTVSWDSGGSDEAPPKPSRPGYP
SPRSSEGFYPSPQHAGQLNHYQVGYPGPHGMPTMPSGGYPSQAGVLDPHEPWNHHRPGDV
PMWSPNMEDGGALDMRGLGQALPPHLMEERLMIQQQQMEEDQRWLEQEECFLKPESRNSR
GSIDREDCSLQGPTGNQHIYQPVGLGKPEHVAPPKKPPRPGAPSHLGSLASLNPVDSYND
GVKPWRIQPQEISPPPTANLDRSNDKVYENVTGLVKAVIEMSSKIQPAPPEEYVPMVKEV
GLALRTLLATVDETIPVLPASTHREIEMAQKLLNSDLAELINKMKLAQQYVLTSLQQDYK
KQMLTAAHALAVDAKNLLDVIDQARLKMIHAQSRGSH
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctgtgagaactctgggtgttggccggctgtgggacccgagagagagcgagca
gggggaccaacccacatggcgaccagtcccggctgcagcctcttccccatgtgctgggct
gcagaatatgacagacacctagcgcacagcaaaggcatggcgacagcttacctggacccc
aacctcaaccacgccctggctgggggggccaagtcgcgcctcagcgcgggcacggccacg
gccacggagcgggctcccggggctcctgacagggtcctgaaggtcttccatcacttcgag
agcaatagcgagcatagcacatgggccagcaacatccgccatggggacgccaccgatgtc
agggggatcatccagaagatcttggacatccacaaggtgaaatgcgttgcgtgcttcggt
ctgcgcctcagccactcccagtccggccaggtccactggctccaccctgatatgggcgtg
tcccacgtgagggagaagtacgagcagaaccgctcccaggaggagtggaggtatgagctg
cgtattcgctaccttccaaaaggattcctgcaccacttcagtgaagacaaacccacactc
aactacttctaccagcaggtgaaaaatgactacatggtagagatagccgaccaggtcgag
caagacattgcacttaagttgggatgccttgaaatcaggagattcttccgggagatgcgg
ggaaatgcgctggacaagaaatcaaactatgagctattagaaaaagatgtgggcttaaga
agattcttccccaagagtttactggattcagtcaaggccaaaaccctgcggaagctgatt
cagcagacgttcaaacaatttgccaacatgaatgatgaccagagcatcctcaagttcctg
gagattctggcgcccgtctacagatatgataaggagtgttttaaatgtgctctcgggtta
agctgggtcatccaagtagagctagccattggacctgaggagggcattagctaccttaca
gacaagggttcgactccaacacacctggccaacttcacccaggtgcagaatattgggtac
tcagtaatggaggacaaggagaggaagggcatgctgcagctcaacgtggccggtgctgcc
gagcctctcacagtgaccacaccatcactcaccacagctgaaaacatggccgacctcata
gacggctactgtcgcctggtcaacggaaccacccagtccttcatcatacggccgcagaaa
gagggagagagagcactgccgtcaatccccaaggtacccaacaatgagaagaggatagta
gagggggtggtccggagcgccggggtgcgtgccatctctgtctcagactctgtgaactct
gtgaccccgacgcctcctaaacctgctaaagccaggcgctttctccttccttttgtcttc
tgtgcccatgactctccgccaaaggaggattgtagtggggatgagacggacgactatgct
gagattatagacgaagacgatacctacaccatgccctcaaccacctctctttatcctaac
cgcccagcagtgagctatggagtagacgaagccagggactatgagatccagagagacagg
atagagctgggacgctgcatcggagagggacagtttggagacgtccaccagggagtctac
aacagcccggagaatcccactctaaacgtggccattaaaacatgcaagaactgcacgtcg
gacagcgtgcgcgagaagttccttcaggaagcactgaccatgcgtcagttcgaccacccc
cacatagtgaagctaatcggtgtgatcacagaaaacccagtgtggatcatcatggagctg
tgcacgatgggagagttgaggtcctttttacaagtaaggaagtacaacctggacctgtca
acgttgatcctgttctcccaccagctcagcacagccttggcctacctggagagcaaacgc
tttgttcatagggacattgctgccaggaatgtgctagtgtcttccacagactgtgtgatg
ctgggagactttggcctctcccgctacatggaggacagctcctactacaaagcttccaaa
gggaaactgccaatcaaatggatggctccagagtccatcaacttcagacgctttacctca
gccagcgatgtgtggatgtttggtgtgtgtatgtgggaaatcctcatgtacggtatcaag
cccttccagggggtaaagaacaatgatgtcatcgggcggatagagaacggagagcgtctg
gccatgccccacaactgtccccccaccctttacagcctgatgaccaagtgctgggcctac
gaccccagcaagagaccccgcttcacagagctcaaaacccagctcagtactatcctagag
gaggagaaggcccagcaggaggagagactaaggatggagatgagacgtcaggtcactgtg
tcctgggactcagggggctccgacgaagccccccctaaacctagcagacctggttacccc
agccctcgatctagtgaaggattctaccccagccctcagcatgctgggcagctcaaccat
taccaggttgggtaccctggcccccacggcatgcctactatgcccagtggaggttaccct
tcccaggccggtgtcctggacccccatgagccctggaaccaccaccggccaggggacgtc
cccatgtggtcccccaacatggaggatggaggtgcgttggacatgcgtggtctgggccag
gcgctgcccccccacctgatggaggagaggctgatgatacagcagcagcagatggaggag
gaccagcgctggttggagcaggaggagtgcttcctgaagccagaatccaggaactcgcgg
ggcagcattgaccgggaggactgcagtctccaagggccgacaggaaaccaacacatatac
caaccagtgggactggggaaaccagagcatgtggcccctcctaagaagcctcctcgtcct
ggagcccccagccacctgggcagtctggccagcctcaaccctgtagatagctacaacgac
ggggtcaagccctggaggatccagcctcaggagatcagccctccccccacggccaacttg
gaccgctccaacgacaaggtgtatgagaatgtgacgggtctggtcaaggctgttatagag
atgtccagtaagatccagccagcccctccagaggagtacgtccctatggtcaaggaggtg
ggactagctttgagaaccctattggccacagtggacgagaccataccagtgttaccagca
agcacacacagagagattgagatggcccagaagctcttgaactctgacctggccgagctg
atcaacaagatgaagctggcccagcagtacgtcctcaccagcctgcagcaggactacaag
aaacagatgctgacggccgcacatgccctggcagtggatgccaagaacctgctagacgtc
atcgaccaggcccggctcaagatgatccatgcccagtcccggggatcacactag
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