Coregonus clupeaformis (lake whitefish): 121572304
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Entry
121572304 CDS
T08357
Symbol
cbsa
Name
(RefSeq) cystathionine beta-synthase a isoform X1
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00260
Glycine, serine and threonine metabolism
cclu00270
Cysteine and methionine metabolism
cclu00670
One carbon pool by folate
cclu01100
Metabolic pathways
cclu01230
Biosynthesis of amino acids
Module
cclu_M00035
Methionine degradation
cclu_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121572304 (cbsa)
00270 Cysteine and methionine metabolism
121572304 (cbsa)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121572304 (cbsa)
Enzymes [BR:
cclu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
121572304 (cbsa)
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
121572304
NCBI-ProteinID:
XP_041740281
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Position
30:complement(50155917..50167017)
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AA seq
589 aa
AA seq
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MPAVPSLKDSSVLGPIGTVCPHAARLRFSNGDANGSAKIQEGPLQLPTKGGVRDKLEVED
MAGTIQAVGERKWIRPDLPSRCTWRLGGNHADSPHTHPQQTKAPKILTNILQRIGDTPLV
RMNKIPKTFGLKCEILAKCEYFNAGGSVKDRISLRMVEDAERAGHLKPGDTIIEPTSGNT
GIGLALAAAVKGYRCIIVMPEKMSMEKVDILRALGAEIVRTPTSARFDSPESHVGVAWRL
KNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGGTITGIARKLKE
RCPDIKIIGVDPEGSILAEPEELNKTDKTQYEVEGIGYDFIPTVLDRSVVDSWYKSNDEE
SFNMSRMLVRDEGLLCGGSSGTAMAAAVRVAKDLKEGQRCVVILPDSIRNYMTKFLSDKW
MFQKGFLKESDIMVNKPWWWNLKLQGLNLSAPLTVLPTVSCQKTIKILKEKGFDQAPVVD
EAGLILGMVTLGNMLASVLAGKVKPSDPVNKVIYNQFKQIRLTDNLGKLSRILETDHFAL
VVHEQIQYLTDGSPSMKQMVFGVVTAIDLLNFVTAREKRERSFSECSDL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcggtcccctcccttaaagacagcagcgtcctgggccctatcggcactgtgtgc
ccacacgctgccaggctacgcttcagcaacggggatgccaacggatccgccaagatccag
gaagggcctttacaactcccaaccaaggggggcgtcagagacaagctagaggtggaggac
atggctggaaccatccaggcggtgggggagaggaagtggatccgtcccgacctgcccagc
cggtgcacctggagactggggggcaaccatgccgactcccctcacacccaccctcaacag
accaaagcccctaaaatccttaccaacatcctccagaggatcggtgacaccccgctggtg
cgcatgaacaagatccccaagaccttcggcctcaagtgtgaaatcttggccaagtgtgag
tacttcaacgcgggcggcagtgtgaaagataggatcagtctgcgtatggtggaggatgca
gagagagcaggacatctgaaaccaggagacaccatcatagagcccacctcagggaataca
ggtatcggtctggccctggctgcagctgtgaagggttaccgctgtatcattgtcatgcct
gagaagatgagcatggagaaggtggacattttgagagccctgggcgcagagatcgtccgt
acgcccaccagcgctcgcttcgattccccagagtctcacgtgggcgtggcctggcgtctg
aagaatgagatccccaactctcacatcctggaccagtaccgtaaccctagtaaccccctg
gcccactatgacaccacagcagaggagatactggagcagtgtgacggtaaagtggacatg
ctggtggcaggcgcgggcacaggcggcaccatcactggcattgcccgcaaactgaaggag
aggtgccccgacatcaagatcatcggtgtggaccctgaaggctccatcctggctgaacca
gaggagctgaacaagaccgacaagacccagtacgaggtggagggcatcggatacgacttc
atccccactgtactggacagatcagtggtggatagctggtacaagtctaacgatgaggag
tccttcaacatgtcccgtatgctggtcagagatgagggcttgctgtgtggtggcagctcg
ggcacggccatggcagcggcggtgagggtggccaaggacctgaaggagggccagcggtgt
gtggtcatcctgccagactccatccgcaactacatgaccaagttcctgagtgacaagtgg
atgttccagaaaggcttcctgaaggagtcagacatcatggtgaacaaaccctggtggtgg
aacctcaagctgcaggggttgaacctctctgcccctctgaccgtcctgcccacggtcagc
tgtcagaagaccatcaagatcctgaaggagaaaggctttgaccaggcccctgtagtggac
gaggctgggctgatcctaggaatggttactctggggaacatgctggcctcagtgctggct
gggaaggtcaaaccctcagacccggtcaacaaggtgatctacaaccagttcaaacagatc
cgtctgactgataacctggggaagctctctcgcatcctggagacggaccattttgccctg
gtggtacacgaacagatccaatacttgacggacggctcccccagcatgaagcagatggtg
tttggtgtggtgacagccatcgacctgctcaacttcgtcacggccagggagaagagggag
aggtccttctctgagtgcagtgacctgtga
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