Coregonus clupeaformis (lake whitefish): 121572384
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Entry
121572384 CDS
T08357
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121572384
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121572384
Peptidases and inhibitors [BR:
cclu01002
]
Aspartic peptidases
Family A22: presenilin family
121572384
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF6541
Oxidored_q3
Motif
Other DBs
NCBI-GeneID:
121572384
NCBI-ProteinID:
XP_041740374
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Position
8:65470938..65483631
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AA seq
447 aa
AA seq
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MSASDSEEDSYNERTALVASKIPPVPFYQQDPDQPQPADMEPRRRPVAPEPAAEPPSLDR
SAVEREPVDLEDDEERTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTEKNGQQLIYT
PFTEDTDTVGERLLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLILSSLMLLFW
FSFMYLGEVFKTYNMAMDYPTVAMIIWNFGAVGMICIHWKGPLQLQQAYLISISALMALV
FIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMIWMV
GMANPARNAEPTNEDTDEEAHQSEGSALARDWAEPETQVSSGINRSYSTEDDLDEEDRGV
KLGLGDFIFYSVLVGKAAATGGDWNTTLACFVAILIGLCLTLLLLAIFKKALPALPISIT
FGLVFYFSTDNLVRPFMDNLAAHQFYI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctcggacagtgaagaggactcctacaatgagaggacagctctggttgcatcc
aagataccgcctgtgccattttaccaacaagaccccgaccaaccccagcctgcagacatg
gagcccaggcggcgcccggtggccccagagcctgcagctgagccccccagcctggacagg
agtgccgtggagcgggagcccgtagacctggaggacgacgaggaacgtaccctcaagtac
ggcgccaagcatgtcatcatgctgttcgtccccgtcaccctttgcatggtggtcgtcgta
gccaccatcaagtcggtcagcttctacactgagaagaacggacagcagctgatctacacg
ccattcacagaggacacagacacggtgggcgagcggctgctcaactctgtgctcaacacc
ctcatcatgatcagcgtcatcgtggtcatgaccatcttcctggtcgtgctctacaaatac
cgctgctacaagttcattcacggatggctcatcctgtcctcactgatgctgctcttctgg
ttcagcttcatgtacctgggggaggtatttaaaacctacaacatggccatggattacccc
acagtagccatgatcatctggaactttggggcggtgggaatgatctgcatacactggaag
gggcccctgcagctgcagcaggcctacctcatctctatctcggccctcatggccctggtg
ttcatcaagtacctgcccgagtggtccgcctgggtcatcctgggagccatctccgtctac
gatttggttgcagtcttgtgccccaaaggtcctctcaggatgcttgtagagacagcacag
gagcgcaacgagcccatcttccctgcactcatatattcatctgccatgatatggatggtt
gggatggccaacccagcaagaaatgcagagcccacaaatgaagatacagacgaggaagca
catcagagtgagggcagcgccctggcgagagactgggcggagccagagacccaagtgtcc
tcagggatcaacaggtcctactcaaccgaggacgacctagacgaggaagaccgaggagtc
aagctgggactgggggacttcatcttctacagtgtgctggtggggaaggctgccgccacc
ggaggagactggaacaccacgctggcctgctttgtggccattctcatcggactctgcctc
actcttctgctgctggccatattcaagaaggccctcccagctctccccatctccatcacc
ttcggcctggtcttctacttctctacagacaacctggtccgcccctttatggacaacctc
gccgcccaccagttctacatctga
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