Coregonus clupeaformis (lake whitefish): 121572414
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Entry
121572414 CDS
T08357
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K09290
tropomyosin 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04260
Cardiac muscle contraction
cclu04261
Adrenergic signaling in cardiomyocytes
cclu04814
Motor proteins
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121572414
04820 Cytoskeleton in muscle cells
121572414
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121572414
04261 Adrenergic signaling in cardiomyocytes
121572414
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121572414
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
121572414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
DUF745
DUF3450
PUMA_CC
TMF_DNA_bd
XhlA
Crescentin
DUF16
NBP1
SlyX
Fib_alpha
ATG16
Lebercilin
Exonuc_VII_L
EzrA
FPP
DUF1664
Laminin_I
Fez1
Motif
Other DBs
NCBI-GeneID:
121572414
NCBI-ProteinID:
XP_041740408
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MEAIKKKMLMLKMDKETALEAADQSEIDKNAAEDKSKQHDDALIQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEMQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTE
ERAELAEGKCAELEEELKNVSNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSICASQRQGGECQHPRHP
GQDPGGPQQLLSGYWSCGLAPPPLLHHLLSLHPLTSGPVSLSVLADCLAGGWGGCSFFLV
KVALSSVHT
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgctgatgctgaagatggataaggagactgctctggaa
gcggctgaccagtccgagattgacaaaaatgcagctgaggataagagcaagcagcatgac
gatgcgttgatccagatgcagaagaagctgaaggggactgaggatgagctggacaaatac
tctgaggccttgaaggatgcccaggagaagctggaagttgcagacaagaaagctgcagat
gctgaggctgaggtggcctctctgaacaggcgtatccagctggttgaggaggagttggac
agggcccaggagagactggccactgctctgcagaaactggaggaggcagagaaagctgca
gatgagagtgagaggggtatgaaggtgattgagaacagggcctccaaggatgaggagaag
atggagatgcaggagatccagctgaaggaggccaagcacatcgctgaggaggccgaccgc
aagtatgaggaggtggctcgtaagctggtgatcattgagggtgatctggagcgtacagag
gagagggcggagctggccgagggcaaatgcgccgagttggaggaggagctgaaaaatgtc
agcaataacttaaagtccctggaagcccaagctgagaagtactcccagaaagaggacaag
tatgaggaggagatcaagatcctgactgacaaactcaaagaggctgaaacccgtgctgag
tttgctgagagatcagtggccaaactggaaaagaccattgatgacctggaagatgagctc
tatgcacagaaattgaagtacaaagccattagtgaggagttggaccatgccctcaatgac
atgacctccatatgcgctagccaacgccaaggaggagaatgtcaacatccacgccaccct
ggacaagaccctggaggacctcaacagcttctgagtggctactggagctgcggcctggcc
cctcctcctcttctccaccacctcttatcgctccaccccctcacctctggtcctgtctct
ctgtctgtgctggctgactgtttagcaggggggtgggggggctgttcattctttttggtg
aaggtagcactttcttcagtccacacctag
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integrated database retrieval system
