KEGG   Coregonus clupeaformis (lake whitefish): 121572988
Entry
121572988         CDS       T08357                                 
Name
(RefSeq) nectin-4
  KO
K06593  poliovirus receptor-related 4
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
cclu04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    121572988
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    121572988
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cclu04515]
    121572988
Cell adhesion molecules [BR:cclu04515]
 Immunoglobulin superfamily
  Nectin family
   121572988
SSDB
Motif
Pfam: Ig_3 V-set I-set ig Ig_2 C2-set_2 TMEM154 Protocadherin LapA_dom EphA2_TM DUF7237 DUF6377 FAM176 LST1
Other DBs
NCBI-GeneID: 121572988
NCBI-ProteinID: XP_041740964
LinkDB
Position
8:15566246..15584393
AA seq 610 aa
MTLLLWILGSFIAVVQGDFVEPSPLFSMRSLTEVETRLPCRFKVEVGQVVVQVTWTKEKA
DGTKDQMITVHHTAGHTEFGQYSGRVRFGSSEPTVDSSLIIMNTVESDEGRYNCHISTFP
SGNFERQLSLTVWTTPISSLDPVVLVEGQSYRLAASCRSVARPLPSLSWDTDLTGSSQNR
SSVGRSVSIHYSLHPLRSMNGKRLDCLVWHPTLEGPRRITNNLVVHYPPNAEISGFDQNW
YAGLEGAVLSCVSGGNPKPQSFTWTRKGGDLPEGVTARNGSLLFNRPLSLTDAGIYQCVA
NNIVGVGKAEVEITVTELPQNPALFNSLLMIIVGGVAGGLLLIMVIVVISVTRHHKRKNK
KLEKELTVKKEEISTLSRQASFRRVNSVSTDARGQFFQMEENIPLRVEGTLRASLSSLGE
QGHIRDSRSTLVGGGGLDYLGRPVLNNSSRRGRESRATDREENRLRVESYVRNSTMSLET
RLHPPIQPSPFPMEQSTKLLRSLNGSAIIPTEGGLHVRHSPLSCSYPPVTDEEEEGESVE
GERGTSPRMSLIDQGRSEDQDNSSQISDAERGLNHHFQQNNGTLRPKPRPNGIPLTPSPH
ASLIHKAQIV
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgacactgctgctgtggatccttgggagtttcattgctgtggtgcagggggactttgtg
gagccctctcccctgttctcgatgcgctccttgaccgaggttgagacccggctgccctgc
cggttcaaggtggaagtgggccaggtggtggttcaggtcacctggaccaaggagaaagca
gatggtaccaaggaccagatgatcacagttcaccacactgccggacacacagagtttggt
cagtactcggggcgtgtgcggttcggcagcagtgagcccacggtggactcgtctctgatc
atcatgaacactgtggagtcagacgagggcaggtacaactgtcacatcagcaccttcccc
tctgggaactttgaacgacagctgtcactcaccgtgtggaccacacccatctcctccctg
gaccccgtggtccttgtcgagggccagtcctaccgattggccgcctcctgccgctccgtg
gcccgccccctccccagcctctcctgggacacggacctgacgggcagttcacagaacagg
agctcggtgggtaggtcagtctccattcactactcgctgcaccccctgaggagtatgaac
gggaagaggctggactgtctggtgtggcacccgactctggagggaccccgcaggatcacc
aacaacctggtggtgcactatcctcccaatgcagagatctcagggtttgatcagaactgg
tatgctggtctggagggagctgtcctcagctgtgtcagtggaggaaaccccaaaccacag
agtttcacctggacaaggaagggtggagacttaccagagggcgtaacggcaagaaatgga
tccctgctgtttaataggcccctcagcctgacagacgctggcatctaccaatgtgtggcc
aataacattgtgggggtggggaaagcagaggtggagatcactgtgacagagttgcctcag
aatccggcgttgttcaatagtctcctgatgatcatagtgggaggggtggccggaggactg
ctactcatcatggtcatcgtagtaatctcagtgacccgtcaccacaaacgcaaaaacaag
aaactggagaaagaactgactgtaaagaaggaggagatcagtactctctccagacaggcc
tctttcaggagagtcaactcagtcagtacggatgctagaggacagttctttcagatggag
gagaatatccctctcagagtggaggggacactgcgggccagtctgtcctctctaggggag
caagggcacatcagggacagtcgctctactctggtagggggaggtgggctagactacctg
ggtcgacctgttctgaacaactcttcacgaagagggagggagagcagagccacagacaga
gaggagaacagacttagggtggagtcatacgtccggaatagcactatgtctttggaaacc
cgtctccacccgcctatccaaccctctcccttcccaatggaacaatccaccaagctgctg
aggtccctgaacggcagcgccatcattccaacagaggggggtttacatgtacggcactcc
cctctcagctgcagctaccctcccgtcacagacgaagaggaggagggtgaaagtgtggag
ggagagcgggggacaagccccaggatgagtctgatagatcaggggaggtcagaggaccag
gacaacagttctcagatctcagatgcggaacgtggactcaaccatcacttccagcagaac
aatggaacgttgagacccaaaccccggcccaacggcatccccctcacgccatccccacac
gcctccctcatccacaaggcccagattgtatag

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