Coregonus clupeaformis (lake whitefish): 121574801
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Entry
121574801 CDS
T08357
Symbol
sp1
Name
(RefSeq) transcription factor Sp1
KO
K04684
transcription factor Sp1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04137
Mitophagy - animal
cclu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121574801 (sp1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121574801 (sp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121574801 (sp1)
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121574801 (sp1)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
121574801 (sp1)
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
121574801 (sp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Zap1_zf1
zf-C2H2_8
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
121574801
NCBI-ProteinID:
XP_041743317
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All DBs
Position
10:6600133..6612317
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AA seq
679 aa
AA seq
DB search
MSDQQDEMAAMVESGGGFLQKRNTNTGQDSQQPSPLALLAATCSRIDTPGESDSGSEQQQ
LDISQAHLTQTANGSWQIIPVSLGSTSGSNTLTTDSTGMVMTAGDSGKNRGQQVLTSVSS
GHQGQQQYVLSSAPSLQGQQVLTMSGGQVVSMPNIQYQVIPQFQTVDGQQLQFAQAGVQQ
DPNAAGAGQFQLVSSPNGGQQLVRAGSGGNILTMPAGLLQQAIPLQNLGLGNSVLQNNQG
QFQLANMPGLLNGNITLLPVSAASGSGGEGSGGDGGSNQQLMQQVVSTSGAYYTNSTTTT
TQTGTSYGGMTQQTQSTNGFQNSVGGIPIQPDNRDQQQPQQILIQPQQLIQGGTSLQTIS
AGGQVFAAPTLTQDALQNLQIQTIPNTSPILLRTIGPNGQVSWQTLQLQSPAGTQITLAP
MQGLTQLGQAQGGTMQLPGLHTINLNSLQNSGLQMHQLQGVPITISNTVGDQGLHTGGDS
LDDGTAMDEGDTSPQPQNRRTRREACTCPFCKDGEARDPNKKKQHICHMQGCGKVYGKTS
HLRAHLRWHTGERPFVCSWSFCGKKFTRSDELQRHKRTHTGEKKFQCTECPKRFMRSDHL
SKHLKTHLNKKPTTGGAAASDNSAPQSGGCGAADGGAGVNDQHALIAMETLSPEGIARLA
SSGINVMQVADLHSNSNGY
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaacaggatgaaatggccgcgatggtggagagcggtggaggcttccttcaa
aagcgaaacacaaataccggacaagactcccagcagccttctcctctagctctgttggca
gcgacctgtagtagaatcgacaccccgggtgagagtgactccggctccgaacaacaacag
ttagacataagccaagcccatctgacccagacagccaatgggagctggcagatcatcccg
gtcagtctcggtagcaccagtggttccaacaccctcaccaccgactccactggcatggtc
atgaccgcgggcgactcagggaagaacagggggcagcaggtgttgacgtcagtctccagt
gggcaccagggacagcagcagtatgtgctgtcctcagctccttctctacagggccagcag
gtcctcaccatgtctgggggccaggttgtgtccatgcccaacatccagtaccaggtgatc
cctcagttccagacggtggatggccagcagctacagttcgcccaggcaggggtgcagcag
gaccctaatgcagctggggccggacagttccagctagtctcctcgcctaacggtggtcag
cagctggttagagcagggagtggagggaatatcctaaccatgcccgccgggctcctacag
caagccatccccctacagaacctaggtctgggtaacagcgtcctgcagaacaaccagggc
cagttccagttggctaacatgcctgggctcctaaacggcaatatcaccctcctcccggtc
agtgcagctagtggctctggaggggaagggagcggaggggacggaggctctaaccagcag
ctgatgcagcaggtagtgtcaacctccggcgcttactacaccaactcaaccaccaccacc
actcagacaggcacctcgtatggaggcatgacacagcagactcagagcaccaacggcttc
cagaactctgttggcgggatccccatccagccagacaacagagatcaacagcagccgcag
cagatcctcattcaaccccagcagctcatccagggagggacctccctgcagacaatctca
gccgggggacaggtgttcgcggccccaacactcacccaggatgccctgcagaacctgcag
attcagaccatccccaacacctctcccatcctgctgaggaccatcgggcccaacggacag
gtgagctggcagaccctccagctgcagagcccagcggggacccagatcaccctggccccc
atgcagggtctcactcagctgggccaggcccagggaggcaccatgcagctccccgggctg
cacaccatcaacctcaactcactgcagaactcaggcttacagatgcaccagctacaaggg
gtccccatcaccatctctaacacagttggagaccagggtttgcatacagggggggacagt
ctggatgacggcacagccatggacgagggagacacgtcccctcagcctcagaaccgccgg
acacgccgggaagcctgcacctgtcccttctgtaaggacggcgaggcacgagatcccaat
aagaagaagcagcatatctgtcacatgcaaggttgtgggaaggtgtacggtaagacatct
cacctgagagcccacctccgctggcacactggagaacgacccttcgtctgcagctggtcc
ttctgtgggaaaaaattcactcgctcagacgaactgcagcgccacaagaggacacacaca
ggtgagaagaagttccagtgtacagagtgtccaaagcgcttcatgcgcagcgaccacctc
tccaaacacctcaagacccacctcaacaagaaacccaccaccggtggcgctgcggcctcc
gataactccgcccctcagtcgggtggatgcggagccgcggatggcggggccggggtcaat
gaccagcacgccctcatcgccatggagacactgtcgcccgagggcatcgcccgattggcc
agcagcggcatcaacgtgatgcaggtggccgatctgcactccaacagtaacggatattga
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