Coregonus clupeaformis (lake whitefish): 121574932
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Entry
121574932 CDS
T08357
Name
(RefSeq) polyhomeotic-like protein 2 isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121574932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121574932
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
121574932
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Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
zf-FCS_1
SAM_2
eIF-5_eIF-2B
SAM_PNT
DUF7608
Motif
Other DBs
NCBI-GeneID:
121574932
NCBI-ProteinID:
XP_041743558
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Position
10:25073848..25119999
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AA seq
896 aa
AA seq
DB search
MGHHTPAARWGAQRRFRRACPKGSRGRAKRGEGTMDSEQGPPASTASSTSTTSSSTTTSS
STGRQAVPQISVYSGIPDRQTVQVNFRVIQQALHRQPNTAAQYLQQMYAAQQQHLMLQTA
ALQQQHLSNAQLQSLAAVQQASIVAGRQSSTQNGTSSQQTGSSQATVSAINLTTSPAAAQ
LISRTQSVSSAPAGSISQQAVLLGSTSSPTTLTASQAHMYLRAQMAQQSNLVQVARSLGR
AVPLSPQLIFTPTATVTAVQSESSTQSSGQQSASSQVQNLAIRSQQGATMSSFQTHNLQA
LSLKQTPVSIQPSPLIKNPSQGSRGAGGKGSSSDGPLDGSKKGESIVTEVRAINMSRSVT
AVSGQPLNTPAYTQIQPHSLVQQHKQQQFVIQQTQASQRTQGQLLQTASIQSHLQTPSLV
PQSPSQAGPIPVLPKPASHHQPSTPSQQATIFHSTISPHALHSSLSQAKAQPVQLTAINL
QIQPALSQASRLVQDSKGQEKPTTLVVRERCPTPSVQQQPTPFTPSPPQDTKPTEQPKTD
PVTPISQPQGVPTTKRLNAAPGTPPPAMTSGNENEAPTVTGSTPQNGENKPPQAIVKPQV
LTHVIEGFVIQEGAEPFPIERLPVMMDSPKKLHEQLSSDPDKTPVSNPTNTTDSETEELT
PQELKDQEDSDAPKLICEFCGWVDFAYKFKGSKRFCSMVCAKRYNVGCTKRIGLFRPERS
KASNRWRRRSHNSCRQSVEPKKQKLSPTPQQSKGGSVSSPLPSQPSQEESSLCSDMSSYE
ETPSPLSGASSGPPAPQALSHQAGRGSDQEATQGRALPLLTKHFLPNNPTKWNVEEVYEF
IHSLPGCQEIADEFRSQEIDGQAMLLLKEDHLMSAMNIKLGPALKIYAHINMLKDS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcacactcccgcagcgcgctggggggcccagaggaggttcaggagagcttgt
ccaaagggcagcaggggaagggccaaacgaggagagggcaccatggacagtgagcagggg
cctccagcctccactgcctccagcaccagtacaaccagtagcagcactaccaccagcagc
agcacgggaaggcaggctgtgcctcagatctctgtgtacagcgggattcctgacaggcag
acggttcaggtaaacttcagggtgatccagcaggcattgcaccggcagcccaacacggct
gcgcagtacctgcagcagatgtacgcagcgcagcagcagcatctcatgctgcagacagca
gccctccagcagcagcacctgagcaatgcacagctccagagcctggctgctgtacagcag
gccagtattgtggcaggaaggcagagctccacccaaaatggcacttcatcccagcaaaca
ggatcatcccaggccacagtgagtgcaattaacctgaccacgtccccggctgcagcccag
ctgatcagccgaacccagagtgtcagctccgcccccgccggcagcatctcccagcaggcc
gtgctcctgggcagcacgtctagccccaccaccctcactgccagtcaggctcatatgtac
ctgcgtgcccagatggcacagcaaagcaaccttgtgcaagttgctaggagcctaggccgt
gctgttcctttgtccccccagctcatcttcacacctacggccacagtgactgcagtccag
tctgagagctccacgcagtcctctggacaacagtctgcctcctcacaggtccagaacctg
gctatccgtagccagcagggggcgaccatgtcctcctttcaaacacacaacctccaggcc
ctcagcctaaagcagacccctgtctccatccagccctctcccctgatcaaaaaccccagc
caggggagccggggcgctggagggaagggcagctcgtccgacggccccttagatgggagc
aagaagggggagagcattgtgacggaggtgcgcgccataaacatgagtcgcagcgtcaca
gctgtgagtggccagcctctcaacactccagcatacacccagatccagccccactccctg
gtccagcagcataagcagcagcagtttgtgatccagcagacccaggcttcccagaggacc
cagggacagctactgcagactgcctccatccagtcccacctgcagactccctccctggtc
ccccagtcccccagccaagcaggccctatccctgtgctgcccaagcccgcctctcaccac
cagccctctacacccagccagcaggcaaccatcttccactccaccatcagcccacatgct
cttcactccagcctgagccaggccaaagcccagccagtgcaactcacagccatcaacctc
cagatacaaccagcactctcacaggcttccagattggtccaggacagtaaaggacaggag
aagccgacgacattggtggtcagagagcgctgcccgactcccagtgtacagcagcagccc
accccgtttaccccgtctccaccacaagacaccaagccaacagagcagcccaagactgac
ccagtcacgcccatcagccaaccacaaggagtccctactaccaagaggttgaatgctgca
cctggtacaccacccccagccatgacctcaggaaatgagaacgaggcacccactgtgacc
ggcagcaccccccagaatggcgagaacaagccaccccaggccatcgtcaagccccaggtc
ctcacccacgtcatcgagggctttgtcatccaggagggagctgaacccttccctattgag
cggttgcctgtaatgatggacagcccaaagaagctgcatgagcagctctcctctgaccca
gacaagacccctgttagtaacccgaccaacaccacagactctgagacagaggagctgacc
cctcaagaattaaaagaccaagaggattcagatgcccccaaactgatctgtgaattctgt
ggctgggtggactttgcctacaaattcaaggggtcaaaacggttctgttccatggtgtgt
gcgaaaaggtataatgttgggtgcactaagcggataggcctcttccgtccagagaggagc
aaagcatccaaccgctggcgcagaaggtcacacaacagctgccgccagagtgtcgagcct
aagaagcagaagctatcccctacacctcagcagagcaaggggggttcagtgtcctccccg
ctcccctcccaacccagccaggaggagtccagcctctgctctgacatgtccagctatgag
gagactccgtcacccctgtcaggagccagttcagggcccccagcaccccaggcgttgtca
caccaggcagggagaggctcagaccaagaggccacccagggcagagcgctaccactcctc
actaagcacttcctgcccaataaccccaccaagtggaatgtagaggaagtctacgagttc
atccactcccttccaggctgccaggagatagcagatgagttccgctcgcaggagatagac
gggcaggccatgcttctactaaaagaggaccaccttatgagtgccatgaatattaaactg
ggacctgcacttaagatctacgcacacatcaacatgctcaaagactcttag
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