Coregonus clupeaformis (lake whitefish): 121575539
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Entry
121575539 CDS
T08357
Name
(RefSeq) vitamin D3 receptor B isoform X1
KO
K08539
vitamin D3 receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121575539
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121575539
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121575539
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121575539
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121575539
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
121575539
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
DUF7206
DUF3795
Motif
Other DBs
NCBI-GeneID:
121575539
NCBI-ProteinID:
XP_041744636
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All DBs
Position
10:complement(50655114..50757153)
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AA seq
458 aa
AA seq
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MRTRIKDIFMVKKRVAKSLSPIYKQGHAKISVMETTAVSTTTLANDEFDRNAPRICGVCG
DKASGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCVDIG
MMKEFILTDEEVQRKKDLIQRRKDEEAQREAQRPRLSEEQSQVIATLVEAHHKTYDDSYS
DFNRFRPPVREGPVTRSASRAASLHSLSDASSDSFSHSPESVDTKLMNFSNLLMMYQEQG
GSPDSDDDGSKLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIM
LRSNQSFNLEDMSWSCGGPDFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVL
LMAICLLSPDRPGVQDHGRIEALQDRLSETLQAYIQLHHPGGHLVYAKMIQKLADLRSLN
EEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEFTRISHV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacaaggattaaagatatctttatggttaagaagagagttgccaagtctttatcc
cccatctacaaacaagggcatgccaaaatctcagtgatggagactacagctgtgagtacc
accactctggccaatgatgagtttgacaggaacgcgccgcggatctgcggtgtgtgcggg
gacaaggcctccggattccacttcaacgccatgacctgcgagggctgcaagggcttcttc
agacgcagtatgaagcgtaaggccagctttacctgtcctttcaacggcagttgcaccata
accaaggacaaccgccgccactgccaggcctgccggctcaagcgctgcgtggacatcggc
atgatgaaggagttcattctgacagacgaggaggtgcagaggaagaaggatctgatccag
cggaggaaggatgaggaggcgcagagggaggcacagcggccccgtctgagcgaggagcag
agccaggtcatcgccacgctggttgaggcacaccacaagacctacgacgactcttactcc
gacttcaaccgcttcaggcctccggtccgagaaggcccagtgacacgcagtgccagcaga
gctgcctctctccactctctgtctgatgcctcatctgactccttcagccactctccagag
tcggtggacactaagctgatgaacttcagtaacctgctgatgatgtaccaggagcagggg
ggcagcccggactccgacgacgacggctccaagctctccatgctgccccacctggccgac
ctggtcagctacagcatccagaaggtcatcggattcgccaagatgatccccggcttcagg
gagctgacggctgaggaccagattgccctgctcaagtcgagtgccatcgaggtgataatg
ctgcgctccaaccaatccttcaacctggaggacatgtcctggagctgcggagggcccgac
ttcaagtactgcgtcaacgacgtcactaaagcgggccacactctggagctgcttgagccc
ctggtcaaattccaggtgggcctgaaaaaactcaacctccacgaggaggaacacgtgctg
ctcatggccatctgcctcctctccccagaccgcccgggcgtgcaggatcacgggcgcatc
gaggccctacaggaccgtttgtcggagacgctgcaggcctacatccagctgcaccacccg
ggcggccacctggtgtatgccaaaatgatccagaagctggcggacctgcgcagcctgaac
gaggagcactccaagcagtaccgctcgctgtccttccagcccgagcacagcatgcagctg
accccgctggtgctggaggtgttcggcagcgagttcactcgcatatcgcacgtctga
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