Coregonus clupeaformis (lake whitefish): 121575574
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Entry
121575574 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
cclu04144
Endocytosis
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121575574
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121575574
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121575574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121575574
04121 Ubiquitin system [BR:
cclu04121
]
121575574
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121575574
Membrane trafficking [BR:
cclu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
121575574
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
HECT type E3
121575574
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
121575574
NCBI-ProteinID:
XP_041744686
LinkDB
All DBs
Position
10:54570854..54618882
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AA seq
870 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKKTEKCNNTHNPKWKQPLTVILTP
FSKLIFRVWSHQTLKADILLGMATLEISETLKSNDMKLSEVVQTLQLCSDRDHTDVVGDL
SVCLDGMQVDPETFTSAERDHVAVPNGEVRQNGDSGNSDIIPPRSSRDTSPSSDSTEDWV
IVPNSHTVSSTGSPAPSPGGSKSTRPPRPARPPPPTPRRPAASPASSSSSTHSEVSEPPA
ADGSSLASASGTSSDPPQENGAAPPQAASGPPPIGAPAGAPPAGGPPRVIPNGPLPPGWE
QRVDQNGRMYFVDHIEKRTTWDRPESLPSGWERRVDPMGRVYFVDHITRTTTWQRPTQES
VRNYEEWQHQRSQLQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGR
VYFVHHTTRMTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGK
SSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQMMSFHPQDL
RRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPD
HLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKD
NNLEECGLEMYFSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQ
TQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRNTIYRHYARSSKQILWFW
QFVKEMDNEKRMRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFN
RLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaacttcaagttaccgtgctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacggccagtcgaagaagacagag
aaatgcaacaacacccacaaccccaaatggaagcagccactcacagtaattctcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaggccgacatcttattg
ggaatggccacattggaaattagtgaaaccctaaagtccaatgatatgaaactgtctgag
gtggtgcagaccctgcagctgtgttcagaccgagaccacacagacgtggtgggggacctg
tcagtctgtctggacggcatgcaggtggacccagagacattcacctctgcagagagggac
catgttgctgttccaaacggggaggtgagacagaacggagatagtggcaacagtgatatc
ataccacccagatccagcagggacacgtccccctccagtgactccacagaggactgggtc
atcgtccccaacagccacacggtcagcagcacggggtctcccgccccatccccagggggc
tccaagtccacacggccgcccagacctgcacggcctcccccacccaccccacgcagacca
gccgcttccccagcctcctccagcagctccacccacagcgaggtgagtgagccccctgct
gcagacggctcgtccctggcttcggccagcgggacctcctcagacccccctcaggagaac
ggagctgcacccccacaggcagccagcggccccccgcccatcggggcaccagccggtgca
cccccagccggtgggcccccccgagtcatccctaacggtccactgcctccaggctgggag
cagagggtggaccagaatggccgcatgtatttcgtggatcacattgagaagaggacgaca
tgggaccgaccagagtctctcccctctgggtgggagcggcgtgtggaccccatgggcagg
gtgtacttcgtggaccacatcacccggaccaccacgtggcagcgccccacgcaggagtca
gtgcgcaactacgaggagtggcagcaccagcgcagccagctgcagggggccatgcagcag
ttcaaccagaggttcatatttgggctccaggatcagcaaatagctgcagcaaacaaagag
tttgacccacttgggccgctgccacatggctgggagaagcgaacagacaccaacggcagg
gtttattttgttcaccacacaacgcggatgactcagtgggaggacccacggacacaaggg
ctgctgaatgacaagcccctacctgaaggctgggagatgaggttcaccgtagacggcatc
ccctactttgtggaccacaaccggagaaccaccacctacatcgaccctcgcacgggcaaa
tcctcccttgagaacgggccccagatcacctacgtcagggacttcaaagctaaagtgcag
tacttcaggttctggtgtcagcaactgtcaatgccacagcacatcaagatcacagtcacc
cgcaaaaccctctttgaggattcattccagcaaatgatgagctttcatccacaagatctc
aggcggagactgtggatcattttccctggagaggaaggcttggactacggaggggtggca
agggagtggttcttcctgctatcccacgaggtgctgaacccaatgtactgcctgtttgag
tatgccggcaaggacaactactgtctccagatcaaccctgcctcctacatcaaccccgac
cacctcaagtacttcaagttcatcggacgcttcattgctatggccttgttccatgggaag
ttcatcgacacgggattctccttgcccttctacaagcgcatcctgaacaaacccctggcc
ctgaaggacctggaatccatcgacccggaattctacaactccctcatctggatcaaggat
aacaacttggaggagtgtggcctggagatgtacttctctgtggacaaggagatcctgggg
gaggtcaccactcacgagctgaagccagacggaggcaacgtcctggtcactgaggaaaac
aaagaggaatacatcaggttggtggcagagtggaggttgtccagaggggtggaagagcag
acccaggccttcttcgagggctttaatgaggtcctcccccagcagtacctgcagtacttt
gacgcaaaggaactggaggtgatgctgtgtggcatgcaggagatagacctggtggactgg
cagaggaacaccatctacaggcactacgcacgcagtagcaaacagatcctctggttctgg
cagtttgtgaaggagatggacaatgagaaacgtatgaggctgctgcagtttgtcactggc
acctgtcggctccccatgggtggcttcgctgacctcatggggagtaatggcccacagaag
ttctgcatcgagaaggtgggcaaagaaaactggcttccaagaagtcacacttgctttaat
cgactggacctgcccccctacaagagctacgagcagctgaaggaaaagctgatgtttgcc
attgaggaaactgagggcttcggacaggagtag
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