Coregonus clupeaformis (lake whitefish): 121575831
Help
Entry
121575831 CDS
T08357
Name
(RefSeq) plakophilin-1 isoform X2
KO
K10387
plakophilin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cclu04812
]
121575831
Cytoskeleton proteins [BR:
cclu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121575831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
121575831
NCBI-ProteinID:
XP_041745056
LinkDB
All DBs
Position
10:complement(8506188..8521646)
Genome browser
AA seq
741 aa
AA seq
DB search
MMTMDPLKSAMSIGNVEETSLALPSDNKLRSKQQRVLDQVQTIKRGKSKYSKNGTLSSPT
KSPTSPMYISVFTDSIKSPTSPNAFSNGTNGLSKMLSHEQSTKQRVLSFKGSTAQRNMSS
SSQWERRLPLSPTVARGQRNSSRSVPDLDPFHTTTQRPALAPAPTRQLQSNRSSFFLTER
GNSQFISNCNGPSQVIGNGNGVQKRQSQWIGTPQTKSSSQARIERAPWNPSMAEPKISVV
ESKIEAGMNDNGQLADITMAEAVQYLSSGDENYQHCGASFIQHSTYSEDKAKQEVLRLKG
IPPLVNLLRSPSNQVQQTASAALRNLAFKDAGNKEEVQRCGGITEALALLRDTDSTETQK
QLTGLLWNLSSADSLKPELVRSALPVLTETVVVPYTGGADETNNNVDPEVFYHATACLRN
LSCAKQSNRQAMRNCQGLIDSLGSYVQDCVAAERPDDKSVENCVCVLHNLSFQLESENPA
LFSRITALAGTTSRANAPTETGPIGCFSPQSSKVQEQESHFDYPVLEQQYPTGAGWLFHS
KTMQSYLSLLGSSQREDTLEACCGALQNLTANQGIVSSVMSQSIVQKLNGLPHISPLLQS
SNSSLQKTAVALVGNLAKNQRLQSIMARQTLPELVGIVSSWTKEGTESDDTLAMVCQTSH
SLLMKEPELGKRLLSNNLVNSLNDLSKNKLFPKASKAAGVLLYSLWSEKDIQSFLKKQGM
NKGSFVNDITSVAHRSVQVIE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggacccgttgaaatcggccatgtccatcgggaatgtggaggagacatct
cttgctttgccatccgataacaaacttcggtccaaacagcagcgggtcttggatcaggtg
caaaccatcaagaggggcaagtcgaagtacagtaaaaatggaactttatcgtcgccaacg
aaatcaccaacgagtcctatgtacatcagcgtattcactgactccattaagtcacctacc
agtcccaatgccttctcgaatggtacaaatggcctctcaaaaatgctcagccacgagcag
agcaccaagcaaagggtactgtccttcaagggatctacagcccagagaaacatgagcagc
tccagccagtgggagagacgattacctctcagccccaccgtagccaggggtcagcgcaac
agcagccgcagtgtgcctgacctggaccccttccacaccactacacagcgtcctgccctg
gctccggcccccacccggcagctccaatccaacaggtccagcttcttccttactgagagg
ggcaacagccagttcatctccaactgcaacggcccctctcaggtcatcggcaacggcaac
ggggtgcagaaaaggcagagccagtggattggtacgcctcagacgaaaagcagcagccaa
gctcgtattgagagggcaccctggaacccctccatggctgagcccaagatatcagtggtc
gagagcaagattgaagcagggatgaatgataatggtcagctcgctgatattaccatggcg
gaggcagtgcagtacctgtccagtggagatgagaactaccagcactgtggcgcctcattc
atccaacactctacctactcagaggacaaggccaagcaggaggtgttgcggctcaaaggg
atccctcctctggtgaacctgctgaggagtcccagtaaccaggtccaacagacagcctct
gccgccctgcggaacctggcctttaaagacgcgggcaacaaggaggaggtccagcgctgt
gggggcatcactgaggccttggccctgctccgagacacagactctaccgagacacagaaa
caactcacaggccttctttggaacctgtcgtctgcagacagtctgaagccagagctggtg
cgtagcgctctgcctgttctgactgagactgtggtagtaccttacacaggaggagcagat
gagaccaacaacaacgtggacccggaggtcttctaccatgctacagcatgtctacgaaat
ctgagctgtgcaaagcaaagcaacaggcaggccatgcgtaactgtcaaggcctcatcgac
tctctgggcagttacgtccaggattgtgtggctgcagagaggccagatgacaagtctgtg
gagaactgtgtctgtgtcctgcacaacctgagcttccagctggagagtgagaacccggcc
ctgttcagccggatcactgccctggccgggaccaccagcagggccaacgcccccactgag
accggccccattggctgcttcagcccacagagcagcaaggtccaggagcaggagagtcac
tttgactaccctgtgttggagcagcaataccctacaggagcaggctggctcttccactcc
aagaccatgcagagttacctgtctctgctggggtccagccagagagaagacaccctggag
gcctgctgtggagccctgcagaacctcaccgctaaccaaggcattgtttctagtgtgatg
agccagagcatagtacagaagctgaacggcctgcctcacatctctcccctgctgcagtcc
tccaactccagcctccagaagactgctgtggctctggtgggaaatctggccaagaaccaa
cgccttcagagcatcatggcccgacagaccctcccagagctggttggcatcgtcagctca
tggaccaaggaagggacagagtctgacgacaccctggccatggtgtgccaaaccagccac
agccttctgatgaaggagcctgagctggggaaacgcctactgagcaacaacctggtcaac
tcactcaacgacctgagcaagaacaagcttttcccaaaggccagcaaagctgcaggtgtg
ctcctctacagcctctggtcagagaaggacatacagagtttcctaaaaaagcaagggatg
aataagggttcctttgtgaatgacatcaccagcgtggctcacaggtctgtgcaggtcatt
gagtaa
DBGET
integrated database retrieval system
