Coregonus clupeaformis (lake whitefish): 121576837
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Entry
121576837 CDS
T08357
Name
(RefSeq) xyloside xylosyltransferase 1-like
KO
K23800
xylosyl alpha-1,3-xylosyltransferase [EC:
2.4.2.62
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121576837
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121576837
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.62 xylosyl alpha-1,3-xylosyltransferase
121576837
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121576837
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Motif
Other DBs
NCBI-GeneID:
121576837
NCBI-ProteinID:
XP_041746302
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Position
11:34210221..34316711
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AA seq
400 aa
AA seq
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MGILRVLVNTMGRVSTFRSYQFVLLLTAALAVVAFYFFGSERHDFSSTTKRIKQTQASHN
ANRNDADLSLDTRLMHPEGGEVVRDGEEEGEVRARRADSGHEVSQYYHALMMFTKVDKSR
SLQEKFRVAMLSMAKYGLFLDEEVLVLHFVSDEASRELGERMLPELLLVGTFQYEVVFHD
VAVLSQKLFPIVEAMQKHFSAGSGAYYSDAIFFLSVAMHHIMPTDLQRIVQLDLDLKYRS
NIRELFLEFDRFPPGAVIGIAREMQPVYRHTFWQYRKENPQSRVGEPPPDGLPGFNSGVM
LLDLEAMRTSALYNQLLEPRNVAQLADQYRFRGHLGDQDFFSMIGMEHPGLFHQLACGWN
RQLCTWWREHGYGDVFQLYYRCEGPVYIYHGNCNTPIPDD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcctgagggttctagtcaacactatgggtagagtcagcaccttcaggtcctat
cagtttgtcctcctcctcacagcagcgctggccgttgtagccttctacttctttggctcg
gagaggcatgatttctccagcaccaccaagcgcatcaagcagacccaggccagccacaac
gccaaccggaacgatgcagacctttccctggacaccaggctgatgcaccctgagggagga
gaggtggtgagggatggggaggaggagggcgaagttagggctaggagggcggacagtgga
catgaggtcagccagtactaccatgccctcatgatgttcaccaaggtggacaagagccga
agcctgcaggagaagttccgggtggccatgttatccatggcgaaatacggcctcttcctg
gacgaagaggtgctggtccttcattttgtgagcgatgaggccagccgagagctgggcgag
aggatgctcccagagctgctcctcgtcggaacgtttcagtatgaggtggtgttccatgac
gtggcggtcctgagccagaagctcttccccatcgtggaggccatgcagaagcacttcagt
gccggctccggggcctactatagtgacgccatcttcttcctgtcagtggccatgcaccac
atcatgcccacagatctgcagcgcattgtacagctggacctggatctgaagtacaggagc
aacatcagggagctgtttctggagtttgatcgcttccctcccggagctgtgatcggcatc
gcccgagagatgcagccggtatacagacacaccttttggcagtaccgtaaggagaaccct
cagtcccgtgtgggtgagcctcctcccgatggcttgccgggcttcaacagtggtgtgatg
ctgctggacctggaggccatgcggacctcggccctctacaaccaactcctggagcccaga
aacgtggcccagctggctgaccagtaccgcttcaggggccacctgggggaccaggacttc
ttcagcatgatcggcatggagcacccagggctgttccaccagctggcctgtggctggaac
cgccagctgtgtacctggtggagggagcatggatatggggacgtgttccagctctactac
cgatgtgaggggccggtgtatatctaccatggaaactgtaatacgcccatacccgatgac
tga
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