KEGG   Coregonus clupeaformis (lake whitefish): 121577101
Entry
121577101         CDS       T08357                                 
Symbol
ankle1
Name
(RefSeq) ankyrin repeat and LEM domain-containing protein 1
  KO
K21411  ankyrin repeat and LEM domain-containing protein 1
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121577101 (ankle1)
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    121577101 (ankle1)
SSDB
Motif
Pfam: LEM-3_GIY-YIG LEM Ank_2 Ank Ank_5 Ank_4 Ank_3
Other DBs
NCBI-GeneID: 121577101
NCBI-ProteinID: XP_041746813
LinkDB
Position
11:18069204..18083865
AA seq 1193 aa
MHHRRRTSLATQLCKAVNDGEPRTVQILLAQGANPNLVGSKGVAAVHLAVGKETEKSIRC
LKLILQHGADPNIRSSDGLTALHIAALWGCCQNLKLLLKNGGNANLKDQDGNKPGDLAKQ
QDNRRCAHLLQEYQSQSLDTEEEDLPQFQYSVYNGQGDASSYTESEHCSVSSHSLSLLSD
FGEGPLSSTRQTSFFELSAISNRHSWRGGPHSGASDYKSNPNTNEWDMDSDWDPPSVLSS
TRMSVAGPRAALPVLQEDVPLTDCSALHPPQDVDLHLPATGNRLSPQLDPLPPCLSRRAS
RKSVSFREEVDEYFPVFSSESLRQEPGGQGIPHSKDCTLDFSEYSEFLDPERMATVLDYQ
GIDVTSPEHVFVFSKDDNNECTEIDMEKTVVGHFPFEEENGEVIENLVEEVKVPERPSCG
SASSSSSGASRYSSCDSDHYITTLEASPRRVSPSEEERKVKSRGVEDDKHTHNPMDTNNV
DTDEFRLTETPNSSKRSKPAMEELPGVVDNLTLSDKISPTKGPGCEEIFPAAVSAGNVEE
LSTTPTEYTPRSGSTLALEEDLPLTPSPFVTGRTHSRLSRCSVRNSKTPESLLSTSSLFE
QTLPTPTRTRRQNIKSQGSDNVFYNTPGGRSRTPVFSGNRTGSTSGDSFVIYESQETQSS
TLGADRGQGSCVSASQADTLIITKDDRGQGSCVSASQADTLISKTMADTVIITPSLADKF
SLLDNDSFEDPHVELLPTYPRKYVIEGGEFLTDDLSSSSDAVTKEGTVGSFGPRVEESWT
TEDADSSSSLSSSQTPSSSSSSYFSPKRGHHPSTPGCTPRYSMSRLPSFHKPQRLASLSY
TPSGRPLVPDLEEPVEYLYTDTEQGHELIETHVPPAANTSLSSSMSTSSSEETVLYDWRS
LQGGRGTVAKGKENQEPVVAQEWSETKGLTDKELRRRLVEMGESPGPISSRTRPVYMQRL
RRLLLEPATQQQQLPDQPQGPAQGHSPELCVALRTLVLPNCQADELALCQQFDQPDQNRK
WREGVIKSSFNYLLLDPRVTKNLPYRSHSMSPLECFQTFISAIFYVGKGKRSRPYSHLYE
ALEYHRGDKTSKKLCSKVQHILQVWKAEQGVISLHCFQNVIPVEAYTREACMVDAIGLKM
LTNLKRGDYYGVVSTWQVKRKRELGVHLLYRAMQIFLAEGERQLRPPDIRAGQ
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgcatcatcgaaggaggaccagtctggcaacacagctgtgcaaagctgtgaacgatgga
gaaccaagaaccgtacagattcttctcgcacaaggagcaaatcccaatcttgtcggaagc
aaaggtgttgctgctgtgcatttggcagttggaaaagagactgagaaaagtatacgctgc
ctaaaattaattctacaacatggggcagaccccaacatcaggtcttcggatggcttgaca
gccctgcacatagcagcgttatggggttgctgtcagaatctcaaactgctgttaaagaat
ggagggaacgctaacttaaaggatcaggatgggaacaaaccaggtgatctggcaaaacaa
caggacaaccgcagatgtgctcacctccttcaggagtaccagtctcagtcgttggacaca
gaggaggaagatctgcctcaattccagtactctgtttacaatggccaaggtgatgcgtca
agctacactgaatccgaacactgcagtgttagctctcacagcctgtccttgctgagtgac
tttggggagggcccactgagtagcacgcgtcagacctcattctttgaactgtctgctatt
agcaacaggcacagttggagaggaggaccccattcaggggcatctgattataaatctaac
cctaacaccaatgagtgggacatggactctgactgggatcctccatcagtgttatcaagc
actcgtatgtccgtcgcaggtcccagagctgcactgcctgtacttcaggaggacgtacca
ctcactgactgcagtgcgctacatccgcctcaggatgtagacctacacctccctgcaact
gggaacagactctctcctcagttggacccactccctccttgcttatcacgacgcgcgagc
cgcaagagtgtgagcttcagagaggaagtggacgaatacttccctgtttttagttcagaa
tctctcaggcaggagccagggggtcagggtattccccactctaaagactgtaccctcgac
ttctcggaatactctgagttcctggatccagagcgcatggccaccgtcctagattaccag
gggatcgacgtcacgtcccctgaacatgtgtttgttttctccaaggatgataataatgag
tgcactgagattgacatggaaaaaacagttgttggacacttcccatttgaggaagagaac
ggagaagtcattgagaacctggtagaagaagtgaaggtccctgaacgaccatcgtgtggc
tctgctagcagcagcagcagtggagctagtaggtacagtagctgtgatagtgaccattac
attacgaccctggaggcgtcccccaggcgggtctcaccctctgaagaggagcgtaaagtt
aaaagtagaggtgtcgaagacgacaaacacacacacaatcccatggacactaacaatgta
gatactgatgaattcagactgactgaaactcccaacagctcaaagaggtcaaaaccagcc
atggaagaactaccaggcgtggtagataacctcacattgtccgataaaatatctccaacc
aaaggtccaggttgtgaagagatatttccagctgctgtctcagcgggtaatgtggaagag
ttgtcaacaacaccgactgaatacactcccagatctggttctactctagcattggaggag
gacctgcctctgaccccaagtccctttgtcactggtaggacgcactcaaggctgagtcgc
tgctcggtaagaaacagcaagacccccgagagcctcctgtccacctcctcgctgtttgag
cagaccttgcctacaccgacacgcacacgccgccaaaacatcaagtcgcaaggcagcgac
aacgtcttttacaacacgccaggcgggcgtagtcgcacccctgtcttttctggaaacagg
acaggtagtacttctggggactcatttgtcatctatgagagccaggagactcaatctagc
actctcggagccgacagaggtcaagggtcatgtgtcagtgccagccaagcggacaccctc
atcatcactaaggatgacagaggtcagggttcttgtgttagtgccagccaagctgacacc
ctcatctctaaaacaatggcagacacagtcatcataactccaagtttagctgacaaattc
tctctactggataatgactcttttgaagatcctcacgtagagcttttacccacttatccg
agaaaatacgttattgaaggtggtgaatttctaaccgacgatttgtccagctccagtgat
gcagttactaaggaggggacagttggtagctttgggccaagagtggaagaatcctggacc
acagaggatgccgactcaagctcatcgctgtcaagttcccagactccatcttcatccagc
tccagttacttctctccaaagagaggtcaccacccctctaccccaggatgcactccgcgc
tacagcatgagccgactccccagctttcacaagccccagcggctggccagcctctcctac
acccccagcggacgtcctctagtcccggacctggaggaaccggtggagtacctctacacg
gacacggagcagggtcacgaactgatcgagacccacgtcccacctgcggccaacacctca
ctcagctccagcatgagcacgtccagcagcgaggagacggtgctgtacgactggcgctcc
ctgcagggcggcagaggcacggtggccaaagggaaggagaaccaggagcccgtggtggct
caggagtggtcagagaccaaagggctgacggacaaggagctgagacgcaggcttgtggag
atgggagagagtccgggacccataagcagccgcacccggccagtgtacatgcagaggctg
aggcggctgttgctggagccggccactcaacaacaacaactgccggaccagccccaaggt
cctgcacagggacacagtccagagctgtgtgtggccctgcggacgttggtgctgcccaac
tgccaggccgacgagctggcactgtgccagcagtttgaccaaccagaccaaaacaggaag
tggcgggaaggtgtcatcaagtccagcttcaactacctgctactggaccccagagtaacc
aagaacctaccgtatcggagtcattccatgagccctttggagtgttttcagaccttcatc
agcgctatattctacgtgggcaagggcaagcgctcccgaccctacagtcatctgtacgag
gctctggagtaccacagaggagataagacttctaagaaactgtgctccaaggtgcagcac
atcctccaggtgtggaaggccgagcagggggtgatctctctgcactgcttccagaacgtc
atccctgtggaggcgtacacacgcgaggcctgcatggtggacgccattgggttgaagatg
ctgaccaacctgaagagaggcgactactacggggtggtgtccacatggcaggtgaagagg
aagagggagctgggagtgcacctgctctaccgagccatgcagatcttcctggctgaggga
gagaggcagctcagacctcctgatatcagggcgggacagtag

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