KEGG   Coregonus clupeaformis (lake whitefish): 121577577
Entry
121577577         CDS       T08357                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RAD18 isoform X1
  KO
K10627  E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cclu04121]
    121577577
   03400 DNA repair and recombination proteins [BR:cclu03400]
    121577577
Enzymes [BR:cclu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121577577
Ubiquitin system [BR:cclu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121577577
DNA repair and recombination proteins [BR:cclu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    121577577
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 SAP zf-RING_6 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-WRNIP1_ubi RING_XB3-XBAT31 zf-rbx1 zf-RING_10 zf-C3HC4_4 Zn_ribbon_PaaD
Other DBs
NCBI-GeneID: 121577577
NCBI-ProteinID: XP_041747238
LinkDB
Position
12:36388453..36461176
AA seq 521 aa
MANLNEADLPPNLTCLKNVDTILRCPICFEFLSIAMMTRCSHNFCSLCIRKFLSYKLQCP
VCNSATTEQDLRNNRILDDLVTNFKSARQQLSKANFDSPPISPKTPALSVKCKTPRQTRG
TKKEASILSHFFRKGPTTSTTSLTTEAPPAQQPIPCRNRLSGTQTVKESPRHTQTVKVDP
DHQVSVKEEPIEDIPAKVLVSVKMEKIDISVTGLAPLADSQSSSQNLKPLVKVECPVCSV
GIPEQFINKHLDSCLTQGEKKESLRSSVGAKRRPMGKLVYTLLSMQELKRRLKECHLSAQ
GTRDQLVKRHQDFVHFYNAQCDALEPKSAKDIAKEVEANEKARNQLQGKTKCAMVFSKNQ
SLGEIDEMHSTYRKLHNSEFSCLIAQVRGRLETAKKSEMKQEVRDEGGEEDQGVGSSSAD
KAAEQEQSDPSLSDSEACCVLMTSPVEEPSEEQQQPSVVEVISRSPSPCLSDVSISSSVS
NIFAGRCFEVLENASSGKRASCSKEEDSSPPLVLGKRARKT
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggccaatttgaatgaagcagatttaccaccaaatctgacttgcctcaaaaatgttgat
accattctccgatgtcccatttgtttcgaattcctgagtatcgcaatgatgaccagatgc
tctcacaacttctgctctttgtgcataagaaaatttctgtcctacaaattgcaatgtcca
gtatgcaattccgctacaacagaacaggacctaagaaacaaccggatactggatgacctg
gtcacaaactttaaatctgcaagacagcagttgtcaaaagctaatttcgactcgcctcca
atatccccgaagaccccggccttgtctgtcaagtgtaaaacacccagacagaccaggggc
accaagaaggaggcctcaatcctcagtcactttttccgaaaggggcccaccacctccaca
acgtctctcactacagaggccccgccagcacagcagcctattccctgcagaaatagactg
tctggcactcaaactgtgaaggagagccctcgtcatacacagactgtgaaagtagaccct
gatcatcaggtctctgtgaaggaggagcccattgaggacataccggccaaggtgctggtg
tctgtgaagatggagaagattgacatctccgtgacagggctggcgcccctggctgattca
cagtcctcatcacagaacctgaagcctctagttaaagtggagtgtcctgtgtgttctgtg
ggcatccctgaacagttcatcaacaagcacctggacagctgtctgacccagggggaaaag
aaggagagccttaggagctccgtaggtgccaagaggaggccgatggggaagctggtgtac
acgctgctgtccatgcaggagctgaagaggaggctgaaggagtgccacctctctgcccag
ggtaccagagaccagctggtcaagaggcaccaggattttgtacacttctacaatgcccag
tgtgacgccctcgaaccaaaatcagccaaagacattgccaaagaagtggaggccaatgag
aaggccaggaaccaactgcaggggaaaacaaaatgtgccatggtcttctctaagaaccaa
agtctgggggaaatcgatgagatgcattcaacttacaggaagctgcataacagtgagttc
tcctgccttatcgcccaggtccggggtcgcctggagacggcgaagaagagtgagatgaag
caggaagtgagggatgagggaggagaggaggaccagggagtgggctccagctctgcagat
aaggcagcagaacaggaacagagtgatcccagtctcagtgactcagaggcctgctgcgta
ttgatgacatcaccagtggaggagccctctgaggagcagcagcagccttctgttgtagag
gtcatctccaggtcacccagcccctgtctcagtgacgtgtccatcagcagctccgtctcc
aacatcttcgctggcagatgctttgaagttttggagaacgcctcgagtgggaagcgggct
tcctgctccaaggaggaagactcttctccgccacttgtcctgggaaaacgagcccggaaa
acctga

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