Coregonus clupeaformis (lake whitefish): 121577647
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Entry
121577647 CDS
T08357
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03008
Ribosome biogenesis in eukaryotes
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121577647
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121577647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121577647
03009 Ribosome biogenesis [BR:
cclu03009
]
121577647
Spliceosome [BR:
cclu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121577647
Ribosome biogenesis [BR:
cclu03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
121577647
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
RNase_P_pop3
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
121577647
NCBI-ProteinID:
XP_041747347
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Position
1:complement(76658904..76661827)
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AA seq
128 aa
AA seq
DB search
MTEAEVNPKAYPLADATLSKTILDLVQQASNYKQLRKGANEATKTLNRGISEFIVMAADA
EPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIATSVTIKEGSQLKPQIQSTQ
MAIERLLV
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagccgaagtgaatccgaaggcctaccccctggccgacgccacactgtccaaa
accatcctggacctcgtgcagcaagcctcaaactacaaacagttgaggaaaggggccaat
gaggccaccaagacattgaaccgtggtatctccgagttcattgtgatggctgctgatgct
gagccactggagatcatcctccacctgccgctgctctgcgaggacaagaacgtcccctac
gtgtttgtgcgctccaagcaggccctggggcgtgcctgtggggtctcccgcccggtcatc
gccacctccgtcaccatcaaggagggttctcagctgaagccccagatccagtctacccag
atggccattgagagactgctggtctga
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