Coregonus clupeaformis (lake whitefish): 121577674
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Entry
121577674 CDS
T08357
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00514
Other types of O-glycan biosynthesis
cclu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121577674
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121577674
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121577674
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
121577674
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
O-Glycan
121577674
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
121577674
NCBI-ProteinID:
XP_041747381
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Position
1:complement(70808953..70840461)
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AA seq
410 aa
AA seq
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MHVSSMGVSKLCFLFSLALCALLLLLPTLQPSQHQGDLPQPRAHNKPARRPGRLVVPLQA
DMGNGTVTVGRKGIDGVSMEQSTPRETKRTGDGDWVYTAGRGDTQGTGKYTHSQIRSEGN
FLHRAGGVAGAGGSRSRNPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKAKEQTFIFTD
GEDQELRRRAGANVVNTNCSAVHTRQALCCKMSVEYDKFIESQRKWFCHMDDDNYVIVPS
LLKLLSSYHHTQDVYLGRPSLDHPIEAAERVKSDGSVSVRFWFATGGAGFCISRGLALKM
SPWASLGNFISTAEKIRLPDDCTIGYIIEALLEVKLTHTQLFHSHLENLQRLPTDTILEQ
VTLSYGGFENRRNVISIGGAFSLVEDPSRFKTVHCLLYPETDWCPSKGHH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctcctcgatgggtgtcagcaagctatgcttcctgttctccctggctctctgt
gccctgctgctcctcctccccaccctccagccctcacagcaccagggggacctgccccag
ccccgggcccacaacaagcctgcccggcgccctggacgtctggtggttcctctccaggca
gatatggggaacgggacagtgacagtggggcgtaaagggattgatggtgtctctatggag
cagagcacacccagagagaccaagaggactggggatggggactgggtgtatacagctggt
cgaggtgacacccagggcactgggaagtatacacactctcagatacggtcggaggggaac
ttcctccacagagctgggggtgtggcgggggctggagggtctcggtccaggaaccctctg
gagctgaaagacattttcatagcggtgaagaccaccaggaagtaccacaagtccagattg
gatctgttgttccagacctgggtgtccaaagccaaagaacagacctttatattcacagat
ggggaggatcaggagctgaggaggagagcaggtgctaacgtcgtcaacaccaactgttca
gcagtacacacgcggcaggccctgtgctgtaagatgtctgtggaatacgacaagttcatc
gagtcacagaggaagtggttctgccatatggatgatgataactatgtgattgtacccagt
ctgctgaagctgctgtcctcctaccaccacacccaggatgtttacctgggccggcccagc
ctcgaccaccccatagaggccgcagagagggtcaagagtgacggatctgtgtcagtgagg
ttctggttcgctacaggaggagcagggttctgtatcagtcgtggtctggccctcaagatg
agtccatgggctagtctggggaacttcatcagcacggcggagaagatccgtctccctgac
gactgcaccatcggttacatcatcgaggcgctgctggaggtgaagctgacacatacacag
ctcttccactcccacctggagaacctgcagaggctgcccacagacaccattctggagcag
gtcactttgagctacgggggttttgagaacaggaggaatgtgatcagcattggcggagcc
ttctctctggtggaggacccgtcacgatttaagactgtccactgcctcctctacccagag
actgactggtgtcctagtaagggtcaccattga
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