Coregonus clupeaformis (lake whitefish): 121577749
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Entry
121577749 CDS
T08357
Name
(RefSeq) polyhomeotic-like protein 2 isoform X1
KO
K11457
polyhomeotic-like protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121577749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121577749
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
121577749
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
SAM_1
SAM_2
zf-FCS_1
eIF-5_eIF-2B
SAM_PNT
DUF7608
Motif
Other DBs
NCBI-GeneID:
121577749
NCBI-ProteinID:
XP_041747538
LinkDB
All DBs
Position
12:complement(9661000..9707465)
Genome browser
AA seq
898 aa
AA seq
DB search
MGHHTPAARWGGQRRFRRACPKGSRGRAKRGEGTMDSEQGPPASSASSTGTTASSTSTSS
SSSAGRQAVPQISVYSGIPDRQTVQVNFRVIQQALHRQPNTAAQYLQQMYAAQQQHLMLQ
TAALQQQQHLSNAQLQSLAVVQQASIAAGRQSSTQNGTSSQHTGSSQTTVSAINLTTSPA
AAQLISRAQSVSSAPAGSISQQAVILGSTSSPTTLTASQAHMYLRAQMAQQSNLVEVARS
LGRAVPLSSQLIFTPTATVAAVQSETSTQSSGQQHASSQVQNLAIRSQQGATTSSFQTHS
LQALSLKQSPVSIQPSPLIKNPSQGSQGAGGKGSWPDGLLDGSKKGGSIVTEVRAINMSR
SVTAVSGQPLITPAYTQIQPHSLVQQHKQQQFVIQQTQASQRTQGQLLQTASIQPHLQTP
SLVPHSPSQPGPIPVLPKPASHHQPSTPSQQATIFHSTISPHALHSTLSQAKAQPVQLTA
INLQIQPAPSQASRLVQDSKGQDKPTSSVVRERCPTPSVQQQSTPSNPSPPQATKPTAQP
KTDPVTPISQPQGVTTTNRVNAAPGTAPPAMTSGIENEAPTLTGSIPQNGENKPPQAIVK
PQVLTHVIEGFVIQEGAEPFPIERLPVMMDSPKKLHEQLSSDPDKTPVSNPTNTTDSETE
ELTPQELKDQEDSDSPKLSCEFCGWVDFAYKFKGSKRFCSMVCAKRYNVGCRKRIGLFHP
ARSKTSNRWHRSHNSGHQSIEPKKQKLSPMPQQTQGDSVPYPLPSQPSQEDSSPCSDMSS
YEEPPSPLSEASSGPPAPQAVSHMAGRGSDQEAPRSRELPLLTQHFLPNNPTKWNVEEVY
EFIRSLPGCQEIADEFRSQEIDGQAMLLLKEDHLMSAMNIKLGPALKIYASINILKDS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggggcatcacactcccgcagcgcgctgggggggccagaggaggttcaggagagcttgt
ccaaagggcagcaggggaagggccaaacgaggagagggcaccatggacagtgaacagggg
cctccagcctccagtgccagcagcactgggaccactgcctccagcacaagtaccagcagc
agcagcagtgcagggaggcaggctgtgcctcagatctctgtgtacagcgggattcctgac
aggcagacggttcaggtaaacttcagggtgatccagcaggcgttgcaccggcagcccaac
acggctgcgcagtacctgcagcagatgtatgcagcgcagcagcagcacctcatgctgcag
acagcagccctccagcagcagcagcacctgagcaatgcacagctccagagcctggctgtc
gtacagcaggccagtattgcggcaggaaggcagagctccacccaaaatggcacttcgtcc
cagcacacaggatcatcccagaccacagtgagtgcaattaacctgaccacgtccccggct
gcagcccagctgatcagccgagcccagagtgtcagctccgcacctgccggcagcatctcc
cagcaggccgtaatcctgggaagcacatccagccccaccactctcactgccagtcaggct
catatgtacctacgtgcccagatggcacagcaaagtaaccttgtggaagtagctaggagc
ttaggccgtgctgttccgttgtcctcccagctcatcttcacgcctacggccacagtggct
gcagtccagtctgagacctccacgcagtcctctggacaacagcacgcctcctcacaggtc
cagaacctggctatccgtagccagcagggggcaaccacgtcctcctttcagacacacagc
ctgcaggccctcagcctaaagcagagccctgtctccatccagccctctcctctgatcaag
aaccccagccaggggagccagggcgctggggggaagggcagttggcctgacggtctcttg
gacgggagcaagaagggggggagcatagtgacggaggtgcgcgctataaacatgagtcgc
agcgtcacagctgtaagtggacagcctctcatcactccagcatacacccagatccagccc
cactccctggtccagcagcacaagcagcagcagtttgtgatccagcagacccaggcttcc
cagaggacccagggccagctactgcagactgcctccatccagccccacctgcagactccc
tccctggtcccccattcccctagccagccaggccctatccctgtgctgcccaagcccgcc
tctcaccaccagccctctacacccagccagcaggcaaccatctttcactccaccatcagc
ccacatgctctccactccaccctgagccaagccaaagcccagccagtacaactcacagcc
attaacctccagatacaaccagcgccctcacaggcttctcgattagtccaggacagtaaa
ggacaggacaagcccacgtcatcggtggtcagagagcgctgcccgactcccagtgtacag
cagcagtctaccccatctaacccgtctccaccacaagccaccaagccaacagcgcagccc
aagactgatccagtcacgcccatcagccaaccacaaggagtcactactaccaacagggtg
aatgctgcacctgggactgcacctccagccatgacctcaggaattgagaatgaggcacct
actttgactggcagcatcccacagaatggggagaacaagccaccccaggccatcgtcaag
ccccaggtcctcacccacgtcatcgagggctttgtcatccaggagggagctgaacccttt
cctattgagcggttgcctgtgatgatggacagcccaaagaagttgcatgagcagctctcc
tctgaccctgacaagactcctgttagtaaccccaccaacaccacagactcggagacagag
gagctgacccctcaagaattaaaagaccaagaggattcagattcccccaaactgagctgt
gaattctgtggctgggtggactttgcctacaaattcaaggggtcaaaacggttttgttcc
atggtgtgtgcgaaaaggtataatgttggttgcagaaagcggataggccttttccatcca
gcaaggagcaaaacatccaaccgctggcacaggtcacacaacagcggccaccagagtatc
gagcctaagaagcagaagctgtcccctatgcctcagcagacccagggggattcagtgccc
tacccccttccctcccaacccagccaggaagactccagcccctgctctgacatgtccagc
tatgaggagcctccgtcgcccctgtcagaagccagctcagggcccccagcaccccaggcg
gtgtcacacatggcagggagaggctcggaccaggaggccccccggagtcgagagttgcct
ctcctcactcagcacttcctgcccaacaaccccaccaagtggaatgtggaggaagtatac
gagttcatccgctcccttccaggctgccaggagatagcagatgagttccgctctcaggag
atagacgggcaggccatgctcctactgaaagaggaccaccttatgagcgccatgaacatt
aaactgggacctgcacttaagatctacgcaagcatcaatatactcaaagactcttag
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