Coregonus clupeaformis (lake whitefish): 121577883
Help
Entry
121577883 CDS
T08357
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121577883 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cclu01007
]
121577883 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cclu03016
]
121577883 (iars1)
Enzymes [BR:
cclu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
121577883 (iars1)
Amino acid related enzymes [BR:
cclu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121577883 (iars1)
Transfer RNA biogenesis [BR:
cclu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121577883 (iars1)
Prokaryotic type
Other AARSs
121577883 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
121577883
NCBI-ProteinID:
XP_041747775
LinkDB
All DBs
Position
12:15609548..15730074
Genome browser
AA seq
1275 aa
AA seq
DB search
MVEPVPESIHFPSEEERILQLWKDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPDDVAKMGIAEYNRQC
RMIVMRYANEWENSVTRMGRWIDFKNDYKTLYPWFMETVWWVFRQLYDKGLVYRGVKVMP
FSTACNTPLSNFESNQNYKDVQDPSVIVNFPLLEDENVCLIAWTTTPWTLPSNLALCVNS
ELQYVKVKDNTTGKVYIMMEARLVALFKTEAEYTIMDKFLGKTLKGKKYKPLFDYFRKCG
ETGAFQVVTDNYVREEEGTGVVHQAPYFGADDYRVCMENNICQRDQAPICPVDSSGCFTA
EVTDFVGQYVKDADKNIIKWLKEQGRLVNTSSFKHSYPFCWRSDTPLIYKAVPSWFIRVE
HMVEKLLENNDKCYWVPEFVRERRFGNWLRDARDWAVSRNRYWGTPIPLWCSEDFEEVVC
VGSMAELEELTGVKVTDLHRESIDQLTIPSRCGKGVLRRVSEVFDCWFESGSMPYAQAHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPALVVNNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLHKEDGITFLYNEGTAKCSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PKLVKFVDMLTNWYVRTNRRRLKGESGTEDCLWALDNLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVEEKDSSSIHYLMLPLVRESLIDKRIESAVCQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALRDITSLQKYILEELNVRQLTLSTDKDKYGITLRAEPDHMV
LGKRLKGAFKSITASIKELKSDQLEAFQKTGSIVVDGHELHEEDLRLMYSFNQTSGSEVM
TSGSATQYEAHSDSQVLVLLDVTPDQSMLDEGVAREVINRIQKLRKKGHLVPSDEITVYY
SCEPAGDYLDKVIQAHADFILATTKAPLKTYPVPKSSSVIVQEKTQLKGSDLDLTIVKGA
AASRAPLTGPACAYININLKLNNKEQEGVVLLENPKGDNCLDMAKLRQVCSSIFGLNNTK
LCVFNGKTELTGKCDLLSLNGKTLTVTSGSSPSDSCPSSESLVSSYVNLQLANCQPAECQ
SGDVGTLLLVNPVGHDCLTHNALLSETAKVFGLRSRRLKLYLDDALTQEIPAETSVKTLD
RKTLYVGVLPTTAES
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcctgttcctgaatccatccacttcccttcggaggaggagaggatcctgcag
ctgtggaaggacaaggactgcttccaggagtgtctcaaacagtccaagaacaggcccaag
tacacgttctatgacgggcctccgttcgccacaggtctcccccactacggtcacatcctg
gcagggaccatcaaagacatcgtgacccgcttcgcccaccagagcggcttccacgtggac
cgccggttcggctgggactgtcacggcctgcctgtggagtatgagattgataagaccctg
ggtatcaagggaccggacgatgtggccaagatggggattgctgagtacaacaggcaatgc
aggatgatcgtcatgagatacgctaacgaatgggagaactctgtaaccaggatgggacgg
tggattgacttcaagaacgactacaagactctgtacccctggttcatggagactgtctgg
tgggtgttcaggcagctgtatgataaaggtctggtgtaccgcggggtgaaggtcatgcct
ttctctaccgcctgtaacacgccgctgtccaacttcgagtctaaccagaactacaaggat
gtgcaggatccgtcagtgatagtgaacttccctctcctggaggatgagaacgtgtgtctg
atcgcctggacaaccaccccttggactctgcctagcaacctggccctctgcgtcaactca
gagctgcagtatgtcaaggtcaaagacaacaccactgggaaggtgtacattatgatggag
gccaggctggtagcgctcttcaagacagaggccgaatacaccatcatggacaagttcctc
gggaagactctgaaggggaagaagtacaagcctctgtttgactacttcaggaagtgcggg
gagacgggtgccttccaggtggtgacggataactatgtcagggaggaggaggggacagga
gtcgtccaccaggcgccatactttggagctgacgattaccgtgtgtgtatggagaataac
atctgccagagagaccaggctcccatctgtcccgtggactcctccgggtgcttcactgct
gaagtcactgactttgtgggacaatatgtcaaggatgctgacaagaacatcatcaaatgg
ctgaaggaacagggtcgtttggtcaacaccagctctttcaagcatagctaccctttctgt
tggagatctgacactcctctgatctacaaggctgttcccagctggtttattagggtggaa
cacatggtggagaagctgctggaaaacaatgacaaatgctactgggttcctgagttcgtg
cgggagcgtcgttttggtaactggcttcgggatgcgcgtgattgggccgtttccaggaac
cgctattggggcacgcccatccccctctggtgcagcgaagactttgaggaggtggtgtgt
gtggggtccatggctgagctggaggagttgacgggagtgaaagtaactgatctgcatcgg
gagagcattgaccagttgactatcccgtcccgctgtggtaaaggcgtgttgcgcagggtc
tctgaggtgtttgactgctggttcgagtccggcagcatgccctatgcccaagcccactac
ccctttgagaacaggaaggagtttgaagacaccttccccgctgacttcatcgctgagggc
atcgaccagaccagaggatggttctacactctcctggtgttgtccacggctctgtttggt
aaaccaccgttcaagaacgtcatcgtcaacggactggtgctcgccagcgatggacagaaa
atgagtaaacggaagaagaactaccctgatcctgctctggtagtgaacaactatggagcc
gatgccctgaggctctacctaatcaactccccggtagtgagagctgagaacctgcgtttc
aaagaggaaggagtcagagatgttctgaaggacgtcttcctcccctggtacaacgcctac
cgcttcctggtccaaaacgtccagagactccacaaggaggacggcatcaccttcctatac
aacgagggcacagccaagtgcagtgacaacatcatggacaagtggatccagtccttcacc
cagtctctcatccagttcttcaaggctgagatggatgcttacaggctgtacacggtggtg
ccaaagcttgtgaagtttgtggacatgctcaccaactggtacgtgaggacgaaccgcaga
cgtctcaagggagagagtggaacagaggactgtctgtgggctctggataatctcttcagt
gttctgttctccatgtgcagactgatggctcccttcaccccctttattacggagatgatg
taccagaacctgcgtcacctgattgaccctgcctctgttgaggagaaggactccagcagc
atacactacctcatgctgccactagtcagggagtcgttgatcgacaagcgtatagagagc
gctgtgtgtcagatgcagtctgtcattgagctaggacgagtcatcagagaccgtaagact
ctgcctgttaagtaccccctgaaggaggtggtcgtgatccaccaagacccagaagctctg
agagacatcacctccctgcagaaatacatcctggaggagttaaatgtccgccagctgacc
ctttccacggacaaagacaaatacggcatcactctgcgggctgaaccggaccacatggtg
ctggggaagaggctgaaaggagccttcaaatccattactgcctccattaaagaactgaag
agcgatcagctggaggccttccagaagactggctccattgtggtggacggtcatgagctt
catgaggaggacctgaggttgatgtacagcttcaaccagacctctgggtcagaggtcatg
acctctgggtcagctacacagtatgaagcccattctgactcacaggtgctggtgttgtta
gatgtcactccagaccagtccatgctggatgagggtgtggctcgtgaggtcatcaaccgc
atccagaaactacgcaaaaagggtcacttggtgccgtctgatgagatcaccgtgtactac
agctgtgagccagcaggtgattacctggacaaggtgatccaggcccacgcggacttcatc
ctggcaaccaccaaggcaccgctcaagacctaccccgtcccgaagtcctccagcgtcatc
gtgcaggagaaaacacagttgaaaggttctgacctggacctgaccatagtaaaaggagcc
gccgcctctcgagctcctctgactggaccagcctgtgcctacatcaacatcaacctcaaa
ctcaacaacaaggaacaagagggtgtggtgctcctggagaaccctaaaggagataactgt
ctggacatggccaagctgaggcaggtctgctccagtatcttcggtctcaacaacaccaag
ctctgtgtgttcaacggcaagacggagttgactggtaagtgtgatctgctgtctctgaat
gggaagaccctgacagtgacatcaggctccagtccaagcgactcctgtcccagctctgag
tctctggtgagctcctacgtcaacctccaactggccaactgtcagcccgctgagtgtcag
agtggagatgtggggaccctgctgctggtcaatcctgtcggacacgactgcctgacccac
aatgctttgctgtctgagacggccaaggtgttcggcctccgcagccgtagactgaagctc
tacctggacgatgcgctcacccaagaaatcccagcagagacgtcagtgaagacgctggac
aggaagactctgtacgttggagttctgcccaccactgcagagtcgtag
DBGET
integrated database retrieval system
