Coregonus clupeaformis (lake whitefish): 121577975
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Entry
121577975 CDS
T08357
Symbol
snrpb
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121577975 (snrpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cclu03019
]
121577975 (snrpb)
03041 Spliceosome [BR:
cclu03041
]
121577975 (snrpb)
03032 DNA replication proteins [BR:
cclu03032
]
121577975 (snrpb)
Messenger RNA biogenesis [BR:
cclu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
121577975 (snrpb)
Spliceosome [BR:
cclu03041
]
Complex A
U1 snRNP components
Sm proteins
121577975 (snrpb)
U2 snRNP components
121577975 (snrpb)
Complex B
U1 snRNP components
121577975 (snrpb)
U4/U6.U5 tri-snRNP components
121577975 (snrpb)
Complex C
U2 snRNP components
121577975 (snrpb)
DNA replication proteins [BR:
cclu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121577975 (snrpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
121577975
NCBI-ProteinID:
XP_041747931
LinkDB
All DBs
Position
12:complement(2740163..2744082)
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AA seq
237 aa
AA seq
DB search
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAGATLAGAPTQYPPGRGGPPPMGRGA
PPPGMMGPPPGMRPPMGPPMGMLPGRGGPMGMPPPGMRPPHPGMRGPLPPGMRPPRP
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgactgttggaaagagtagtaagatgctgcaacacatcgacttcaggatgcggtgcatc
ctgcaggacggtcgtatcttcatcgggactttcaaagcctttgacaaacacatgaacctc
atcttgtgtgactgtgacgagttcagaaagatcaagcccaagaattccaaacagcctgag
cgtgaagagaagagggtactgggccttgtgctgctcagaggagagaatctggtttccatg
acagtggaaggaccccctcccaaagatactggcattgcccgtgtgcccctggctggtgtg
gcaggaggcccaggagttggcagggcagctggcagaggcgtccccgctggagcacccatg
ccccaggcacccgcaggcctcgctgggccggtcagaggagtaggcggcccctcgcaacag
gtgatgaccccacagggcaggggaacagtcgctgcagcagcagctggtgccaccctcgct
ggtgcccccacacagtacccaccaggcagaggaggaccccctcccatgggtcgcggtgca
ccccctccagggatgatgggccctcccccaggcatgaggcctcccatgggtcctccaatg
ggaatgctacctggccgcggaggtccaatgggcatgccccctcccggcatgaggccgcca
cacccaggcatgagaggaccacttcccccaggaatgcgtccccccagaccttga
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