Coregonus clupeaformis (lake whitefish): 121578020
Help
Entry
121578020 CDS
T08357
Name
(RefSeq) vitamin D3 receptor B-like isoform X1
KO
K08539
vitamin D3 receptor
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121578020
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121578020
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cclu03310
]
121578020
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121578020
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121578020
Nuclear receptors [BR:
cclu03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
121578020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121578020
NCBI-ProteinID:
XP_041747994
LinkDB
All DBs
Position
12
Genome browser
AA seq
482 aa
AA seq
DB search
MYFLDIDDDKRIKGNLVLGKVVHRIRDILMVKRVVKSLSAIYKQVHAKISVMETTAVSTS
TLTNDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTIT
KDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKKDLIQRRKDEEAQREAQREAQRPRLS
EEQSQVIATLVEAHHKTYDDSYSDFNRFRPPVREGPVTRSASRAASLHSLSDASSDSFSH
SPESVDTKLMNFSNLLMMYQDQGGSPDSNDDDSSKLSMLPHLADLVSYSIQKVIGFAKMI
PGFRELTAEDQIALLKSSAIEVIMLRSNQSFNLEDMSWSCGGPDFKYCVNDVTKAGHTLE
LLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHGRIEALQDRLSETLQAYIR
LHHPGSCLVYARMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEFTRVS
PI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctagatattgacgacgataaacggattaagggcaacttggtcttgggaaaa
gttgtacacaggattagagatatattaatggttaagagagttgtcaagtctttatccgcc
atctacaaacaagtgcatgccaaaatctcagtgatggagactacggctgtgagtacctcc
actctgaccaatgatgagtttgacaggaatgcaccgcggatctgcggtgtgtgcggggac
aaagccaccggattccacttcaacgccatgacctgcgagggctgcaagggtttcttcaga
cgcagtatgaagcgtaaggctagcttcacatgccccttcaatggcagttgcactatcacc
aaggacaaccgccgccactgccaggcctgccggctcaaacgctgcgtggacatcggcatg
atgaaggagttcattctgacagatgaggaggtgcagaggaagaaggatctgatccagcgg
aggaaggatgaggaggcgcagagggaggcgcagcgggaggctcagcgaccccggctgagc
gaggagcagagccaggtcatcgccacgctggtggaggcacaccacaagacctacgacgac
tcctactccgacttcaaccgcttcaggcctccggtccgtgaaggcccagtgacacgcagt
gcaagcagagctgcttctctccactctctgtctgatgcctcatctgactccttcagccac
tctccagagtctgtggacactaagctgatgaacttcagtaacctgctgatgatgtaccag
gaccagggtggcagcccggactctaacgacgacgacagctccaagctgtccatgttgccc
cacctggccgacctggtcagctacagcatccagaaggtcattggtttcgctaagatgatc
cccggcttcagggagctgacggctgaggaccagatcgccctgctcaagtcaagcgccatt
gaggtgatcatgctgcgctcaaaccagtccttcaacctggaggatatgtcctggagctgt
ggtgggcccgacttcaagtactgcgtcaacgacgtcactaaagcgggccacactctggag
ctgctggagcccctggtcaaattccaggtgggccttaagaaactcaacctccatgaggag
gaacatgtgctactcatggccatctgcctcctctccccagaccgtcctggcgtgcaggac
cacgggcgcatcgaggcactgcaggaccgtctgtcggagacgctgcaggcctacatccgg
ctgcaccacccgggcagctgcctggtgtacgctaggatgatccagaagctggcggacctg
cgcagcctgaacgaggagcactccaagcagtaccgctcgctgtccttccagccagagcac
agcatgcaactcaccccgctggtgctagaggtgttcggcagcgagttcactcgcgtttcg
cccatctga
DBGET
integrated database retrieval system
